RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CMTM5Q96DZ9 223 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ZHX1-C8orf76Q96EF9 292 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 DNAJA3Q96EY1 480 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ARL5BQ96KC2 179 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 RSPO3Q9BXY4 272 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OR11A1Q9GZK7 315 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OPN3Q9H1Y3 402 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-208ENST00000520228 EFCAB1Q9HAE3 211 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM181Q9P2C4 612 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 RPS6KB2Q9UBS0 482 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 KCNN3Q9UGI6 736 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 TRAPPC4Q9Y296 219 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 AP3M1Q9Y2T2 418 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ARL2BPQ9Y2Y0 163 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 GRIP1Q9Y3R0 1128 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ABCA12Q86UK0 2595 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ADGRG4Q8IZF6 3080 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 DNAJC13O75165 2243 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 ITPR2Q14571 2701 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 A0A1B0GWA3 101 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM72A0PK05 275 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 TUBAL3A6NHL2 446 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 CCT8L1PA6NM43 557 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 A8MVM7 634 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 EIF1BO60739 113 aaKnown RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 CYTIPO60759 359 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 GCM2O75603 506 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 TSHBP01222 138 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 OPN1SWP03999 348 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 YES1P07947 543 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 AGTR1P30556 359 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 CD79BP40259 229 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 NUDT2P50583 147 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 RGS8P57771 180 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 NCALDP61601 193 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 SLC35A1P78382 337 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 RASGEF1BQ0VAM2 473 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 BNIP2Q12982 314 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 VEZF1Q14119 521 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 DUSP7Q16829 419 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 EXOC3L2Q2M3D2 409 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 GLIPR1L2Q4G1C9 344 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 WDR38Q5JTN6 314 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 ERICH5Q6P6B1 374 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 ARPINQ7Z6K5 226 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 PIGWQ7Z7B1 504 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 COMTD1Q86VU5 262 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 TUSC5Q8IXB3 177 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 OR52E4Q8NGH9 312 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 SLC26A7Q8TE54 656 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 FAM222BQ8WU58 562 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 DNAJA4Q8WW22 397 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 C14orf79Q96F83 325 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 SLC47A1Q96FL8 570 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 HOPXQ9BPY8 73 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF559Q9BR84 538 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 GPATCH1Q9BRR8 931 aaKnown RBP5.94□□□□□ -1.46
SDCBP-208ENST00000520228 FNDC11Q9BVV2 318 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 POTEKPQ9BYX7 375 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 WNT5BQ9H1J7 359 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM27Q9HBJ8 222 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 PTTG2Q9NZH5 202 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 PCNX1Q96RV3 2341 aa5.94□□□□□ -1.46
SDCBP-208ENST00000520228 MED12Q93074 2177 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 A0A0B4J293 547 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF724A8MTY0 619 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 NDUFAB1O14561 156 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 GPR171O14626 319 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 FMO6PO60774 539 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 DCTN3O75935 186 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 LGI1O95970 557 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 IFNA14P01570 189 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 GPIP06744 558 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PNMTP11086 282 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 POU2F1P14859 743 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 KLK2P20151 261 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ANOS1P23352 680 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 HTR2AP28223 471 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PRDX6P30041 224 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PPP5CP53041 499 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-208ENST00000520228 H3F3AP84243 136 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 TLE4Q04727 773 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 LIPEQ05469 1076 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 CEACAM7Q14002 265 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PDK3Q15120 406 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 OR1Q1Q15612 314 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 OR7A5Q15622 319 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 C1orf140Q5VVS0 124 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ULK3Q6PHR2 472 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 HACD2Q6Y1H2 254 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 TMPRSS11FQ6ZWK6 438 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 CCDC80Q76M96 950 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 NUFIP2Q7Z417 695 aaKnown RBP5.93□□□□□ -1.46
SDCBP-208ENST00000520228 RANBP3LQ86VV4 465 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-208ENST00000520228 GPR32P1Q8NGA4 272 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 OR5M8Q8NGP6 311 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 LINC01560Q8TB33 94 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms