RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SLC39A6Q13433 755 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 TFDP2Q14188 446 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 CAPRIN1Q14444 709 aaKnown RBP3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 RGNQ15493 299 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 FAM92BQ6ZTR7 304 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 C12orf56Q8IXR9 622 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 FAM58AQ8N1B3 248 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 SNX31Q8N9S9 440 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 C11orf72Q8NBR9 251 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR51L1Q8NGJ5 315 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR13C9Q8NGT0 318 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 LRRC29Q8WV35 223 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 BMFQ96LC9 184 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 CFAP53Q96M91 514 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 RNF145Q96MT1 663 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 AGMATQ9BSE5 352 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 UBE2ZQ9H832 354 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR12D3Q9UGF7 316 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 NEU3Q9UQ49 428 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 WSB1Q9Y6I7 421 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 CAMTA1Q9Y6Y1 1673 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF646O15015 1829 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 A0A1W2PRF3 423 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 A0A1W2PRM7 423 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ANKRD65E5RJM6 399 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 H3BN98 237 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 H7C417 338 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 GABRPO00591 440 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 RP2O75695 350 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC25A14O95258 325 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 BCHEP06276 602 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 CTSLP07711 333 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 HOXC4P09017 264 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 PGA5P0DJD9 388 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 PRPS2P11908 318 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 SERPINB8P50452 374 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 SYNJ2BPP57105 145 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ATP6V0D1P61421 351 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 IRF4Q15306 451 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 TSC22D1Q15714 1073 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF658BQ4V348 819 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR2W3Q7Z3T1 314 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 PDCL2Q8N4E4 241 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 METTL13Q8N6R0 699 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF433Q8N7K0 673 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR10W1Q8NGF6 305 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 RGP1Q92546 391 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 CYYR1Q96J86 154 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 CEP170P1Q96L14 293 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF317Q96PQ6 595 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC25A39Q9BZJ4 359 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 MED4Q9NPJ6 270 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 LHX9Q9NQ69 397 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 CTSFQ9UBX1 484 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 MTFP1Q9UDX5 166 aa3.47□□□□□ -1.85
HMGB1P46-201ENST00000520062 ASTN1O14525 1302 aa3.46□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF318Q5VUA4 2279 aa3.46□□□□□ -1.85
HMGB1P46-201ENST00000520062 SYCE1LA8MT33 242 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 H7C1H1 209 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 NDUFS8O00217 210 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ANGPTL7O43827 346 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ETHE1O95571 254 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 GLAP06280 429 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 TPM1P09493 284 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 PGA4P0DJD7 388 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 PGA3P0DJD8 388 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 TCN2P20062 427 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 PTNP21246 168 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 GCSAMLQ5JQS6 135 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 AVPI1Q5T686 147 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLC25A25Q6KCM7 469 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 DNAJC24Q6P3W2 148 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ASCL4Q6XD76 172 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 KIF2BQ8N4N8 673 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 Q8N7P7 452 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 COX18Q8N8Q8 333 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR11H7Q8NGC8 314 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR5AR1Q8NGP9 310 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF596Q8TC21 504 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 TM4SF18Q96CE8 201 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 LRRC39Q96DD0 335 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 SGTBQ96EQ0 304 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF799Q96GE5 643 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 KIR3DX1Q9H7L2 352 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 SYNDIG1Q9H7V2 258 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 PALLDQ8WX93 1383 aa3.46□□□□□ -1.86
HMGB1P46-201ENST00000520062 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 A0A096LNJ9 63 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 LOC100653049A0A140TA62 436 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLC19A2O60779 497 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 KRT34O76011 436 aa3.45□□□□□ -1.86
HMGB1P46-201ENST00000520062 SEMA3DO95025 777 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms