RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	ZNF582	Q96NG8	517 aa	Predicted RBP	20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	RBM4	Q9BWF3	364 aa	Known RBP	20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	PTTG3P	Q9NZH4	202 aa		20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	PDP1	Q9P0J1	537 aa	Predicted RBP	20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	DNAJB9	Q9UBS3	223 aa		20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	POMP	Q9Y244	141 aa		20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885	YLPM1	P49750	1951 aa	Known RBP	20.54	■□□□□ 0.88
CNOT7-204	ENST00000518885		F5H5K5	113 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	GRK5	P34947	590 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	MVK	Q03426	396 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	CRMP1	Q14194	572 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	DDO	Q99489	341 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	NIPSNAP1	Q9BPW8	284 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	C1QTNF5	Q9BXJ0	243 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	CMC2	Q9NRP2	79 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	MRPL22	Q9NWU5	206 aa	Known RBP	20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	IL19	Q9UHD0	177 aa		20.53	■□□□□ 0.88
CNOT7-204	ENST00000518885	IFNL4	K9M1U5	179 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	ANXA8	P13928	327 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	ENTPD1	P49961	510 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	CBX1	P83916	185 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	CR1L	Q2VPA4	569 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	OR9Q1	Q8NGQ5	310 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	OR13G1	Q8NGZ3	307 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	OR4Q3	Q8NH05	313 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	DNAJC9	Q8WXX5	260 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	SOX7	Q9BT81	388 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	MMADHC	Q9H3L0	296 aa	Predicted RBP	20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	POFUT1	Q9H488	388 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	TREM2	Q9NZC2	230 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	TMEFF2	Q9UIK5	374 aa	Predicted RBP	20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	WIPI2	Q9Y4P8	454 aa		20.52	■□□□□ 0.88
CNOT7-204	ENST00000518885	TCRBV3S1	A0A5B6	114 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	FKBP6	O75344	327 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	LCAT	P04180	440 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	MSMB	P08118	114 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	ACSM4	P0C7M7	580 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	SPI1	P17947	270 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	THBS2	P35442	1172 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	BNIP1	Q12981	228 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	TAF13	Q15543	124 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	KRTAP27-1	Q3LI81	207 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	TMEM255A	Q5JRV8	349 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF362	Q5T0B9	420 aa	Predicted RBP	20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	ACSM5	Q6NUN0	579 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	COLCA1	Q6ZS62	124 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	TEX29	Q8N6K0	151 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	ATG16L2	Q8NAA4	619 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR8G5	Q8NG78	346 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR6K6	Q8NGW6	343 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	NMNAT2	Q9BZQ4	307 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF665	Q9H7R5	613 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	DDX28	Q9NUL7	540 aa	Known RBP	20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	NOP16	Q9Y3C1	178 aa	Known RBP	20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	COMMD3-BMI1	R4GMX3	469 aa		20.51	■□□□□ 0.87
CNOT7-204	ENST00000518885	TVP23A	A6NH52	213 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885		M0R135	149 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	GSC2	O15499	205 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	DEAF1	O75398	565 aa	Predicted RBP	20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	HMGN1	P05114	100 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	SPARC	P09486	303 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	POU1F1	P28069	291 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	SLC6A9	P48067	706 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	TEX30	Q5JUR7	227 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	AVPI1	Q5T686	147 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	PAPD5	Q8NDF8	572 aa	Known RBP	20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR51L1	Q8NGJ5	315 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	OTULIN	Q96BN8	352 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	ZNF799	Q96GE5	643 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	GAL3ST1	Q99999	423 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	KIF17	Q9P2E2	1029 aa		20.5	■□□□□ 0.87
CNOT7-204	ENST00000518885	TRAV20	A0A0B4J274	112 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	ISPD	A4D126	451 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	OSM	P13725	252 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	SLC15A1	P46059	708 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	SRP9	P49458	86 aa	Known RBP	20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	SCGB2A2	Q13296	93 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	HLX	Q14774	488 aa	Predicted RBP	20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR2T2	Q6IF00	324 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	DRAM2	Q6UX65	266 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	DCXR	Q7Z4W1	244 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	OR5AS1	Q8N127	324 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	TMEM186	Q96B77	213 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	NRBF2	Q96F24	287 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	MAP6	Q96JE9	813 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	COPS4	Q9BT78	406 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	SP140L	Q9H930	580 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	PNRC2	Q9NPJ4	139 aa	Known RBP	20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	PPP1R3C	Q9UQK1	317 aa		20.49	■□□□□ 0.87
CNOT7-204	ENST00000518885	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	20.48	■□□□□ 0.87	2e-7	■■■■■ 28
CNOT7-204	ENST00000518885	IQCF6	A8MYZ5	107 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	APOC1	P02654	83 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	SRP14	P37108	136 aa	Known RBP	20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	LMO4	P61968	165 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	PGAP1	Q75T13	922 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	MRPL21	Q7Z2W9	205 aa	Known RBP	20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	PLEKHA8	Q96JA3	519 aa		20.48	■□□□□ 0.87
CNOT7-204	ENST00000518885	CADM1	Q9BY67	442 aa	Known RBP	20.48	■□□□□ 0.87

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms