RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CLDN34H7C241 214 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 J3QR06 171 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 K7EPK0 472 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 M0R3H8 397 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OVOL3O00110 214 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CORTO00230 105 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RFXANKO14593 260 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 P2RX6O15547 441 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF208O43345 1280 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR1F1O43749 312 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 EDIL3O43854 480 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 DOK2O60496 412 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CTSVO60911 334 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CA11O75493 328 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RBMXL2O75526 392 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 JTBO76095 146 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MT-CO1P00395 513 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PDGFBP01127 241 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 WNT1P04628 370 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 EIF4EP06730 217 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF735P0CB33 412 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM157CP0CG43 387 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 LAMP1P11279 417 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FGF5P12034 268 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TNFSF4P23510 183 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 AOAHP28039 575 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PSMB4P28070 264 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCND3P30281 292 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARL2P36404 184 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARL3P36405 182 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GABRA2P47869 451 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MTNR1AP48039 350 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GLIPR1P48060 266 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CX3CR1P49238 355 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 AGTR2P50052 363 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 BLKP51451 505 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 UCP2P55851 309 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 H2BFSP57053 126 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ERVPABLB-1P60509 514 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 DCAF7P61962 342 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PAFAH1B2P68402 229 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 BTN3A2P78410 334 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM189BP81408 668 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RHOGP84095 191 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM3AP98173 230 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPIBQ01892 262 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PPP1R8Q12972 351 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 NFATC2Q13469 925 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 KIAA0040Q15053 153 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 HYAL4Q2M3T9 481 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCTN1Q2MV58 587 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF750Q32MQ0 723 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF667Q5HYK9 610 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPATA46Q5T0L3 261 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM102AQ5T9C2 384 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRAMEF17Q5VTA0 474 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 METRNLQ641Q3 311 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM225Q6GV28 225 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPUSD3Q6P087 351 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TNFAIP8L2Q6P589 184 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 KIRREL2Q6UWL6 708 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 LCTLQ6UWM7 567 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CLEC18BQ6UXF7 455 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 COX15Q7KZN9 410 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPRIN1Q7Z2K8 1008 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GDF7Q7Z4P5 450 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC35E3Q7Z769 313 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF679Q8IYX0 411 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM58AQ8N1B3 248 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GBGT1Q8N5D6 347 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM71E2Q8N5Q1 922 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCEANCQ8N8B7 351 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCDC71LQ8N9Z2 235 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SUMF2Q8NBJ7 301 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 STEAP2Q8NFT2 490 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC26A10Q8NG04 563 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR11H1Q8NG94 326 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4B1Q8NGF8 309 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR11H2Q8NH07 326 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SUN3Q8TAQ9 357 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPPL2AQ8TCT8 520 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPX8Q8TED1 209 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CASTOR1Q8WTX7 329 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 GEMIN6Q8WXD5 167 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM186Q96B77 213 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 COA7Q96BR5 231 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RASD2Q96D21 266 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MUCL1Q96DR8 90 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MS4A6EQ96DS6 147 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 KTI12Q96EK9 354 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 IGSF21Q96ID5 467 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 C4orf36Q96KX1 117 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms