RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RSPH14Q9UHP6 348 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 MMP17Q9ULZ9 603 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 UBQLN1Q9UMX0 589 aaKnown RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 ZNF256Q9Y2P7 627 aaPredicted RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CDH10Q9Y6N8 788 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 V9GY05 133 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ASTN1O14525 1302 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 DLG5Q8TDM6 1919 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 IGKV1D-8A0A087WSZ0 117 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TRAV9-2A0A087WT02 112 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 GLYATL1P3A0A0U1RQE8 302 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 A0A1W2PRF3 423 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 A0A1W2PRM7 423 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 FAM231BA6NCW3 169 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 SAP18O00422 153 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 CDX4O14627 284 aaPredicted RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 XRCC2O43543 280 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CLDN11O75508 207 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
HERC4-215ENST00000515753 CLIC3O95833 236 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 LY6G6DO95868 133 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CD160O95971 181 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 NR2C1P13056 603 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 IL9P15248 144 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 MGMTP16455 207 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 HMGCLP35914 325 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 AQP2P41181 271 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CSKP41240 450 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 GLP1RP43220 463 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 MEOX2P50222 304 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CRISP1P54107 249 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 STXBP1P61764 594 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 IGLV3-21P80748 117 aaPredicted RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 XRCC4Q13426 336 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 GPR176Q14439 515 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ANGPT1Q15389 498 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TGIF1Q15583 401 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PRR4Q16378 134 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PSG3Q16557 428 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 RPEL1Q2QD12 228 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 QRICH1Q2TAL8 776 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TCEAL5Q5H9L2 206 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 OR2B11Q5JQS5 317 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TPRG1LQ5T0D9 272 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ANKRD26P1Q6NSI1 321 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TMPRSS11AQ6ZMR5 421 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 Q6ZN92 141 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PID1Q7Z2X4 250 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ZNF546Q86UE3 836 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 FAM86B1Q8N7N1 296 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 OR10G3Q8NGC4 313 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CLHC1Q8NHS4 586 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ANGPTL6Q8NI99 470 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ZNF502Q8TBZ5 544 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ZNF564Q8TBZ8 553 aaPredicted RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 SUN5Q8TC36 379 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CA5BP1Q8WTZ4 195 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PDCD6IPQ8WUM4 868 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 ACOT11Q8WXI4 607 aaPredicted RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 FGF14Q92915 247 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ISOC2Q96AB3 205 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 TRNT1Q96Q11 434 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 LZTS2Q9BRK4 669 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PELOQ9BRX2 385 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 CWH43Q9H720 699 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 PRSS16Q9NQE7 514 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ZNF302Q9NR11 478 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CLN6Q9NWW5 311 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ADA2Q9NZK5 511 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ARMCX1Q9P291 453 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CTSFQ9UBX1 484 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 KIF25Q9UIL4 384 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 GNPTGQ9UJJ9 305 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ING4Q9UNL4 249 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 GOLT1BQ9Y3E0 138 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 CCDC171Q6TFL3 1326 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 ADGRA3Q8IWK6 1321 aa2.3□□□□□ -2.04
HERC4-215ENST00000515753 KIAA0100Q14667 2235 aaKnown RBP2.3□□□□□ -2.04
HERC4-215ENST00000515753 PHF3Q92576 2039 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 IGLV3-22A0A075B6J6 115 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 IGHV3OR16-13A0A075B7E8 117 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 TSPAN11A1L157 253 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 SLC22A20A6NK97 555 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 IQCF5A8MTL0 148 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 LOC730098B7Z3J9 87 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 TBL1XO60907 577 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 ZNF254O75437 659 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 LYPLA1O75608 230 aaPredicted RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 DUSP14O95147 198 aaKnown RBP2.29□□□□□ -2.04
HERC4-215ENST00000515753 VAPBO95292 243 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 LCA5LO95447 670 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 HBE1P02100 147 aa2.29□□□□□ -2.04
HERC4-215ENST00000515753 SERPINA5P05154 406 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms