RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 BHLHE23Q8NDY6 225 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 OR4S1Q8NGB4 309 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 OR5L1Q8NGL2 311 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 TMEM255BQ8WV15 326 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 ITPKCQ96DU7 683 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 CPPED1Q9BRF8 314 aaPredicted RBP8.99□□□□□ -0.97
DDX41-216ENST00000513562 TMEM109Q9BVC6 243 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 TMEM100Q9NV29 134 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 THAP1Q9NVV9 213 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 HIF3AQ9Y2N7 669 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 TET2Q6N021 2002 aaPredicted RBP8.98□□□□□ -0.97
DDX41-216ENST00000513562 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 A6NIZ1 184 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 EVPLLA8MZ36 301 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 LGALS8O00214 317 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 ADAM20O43506 726 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 OR10H3O60404 316 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 MPIG6BO95866 241 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 ECDO95905 644 aaPredicted RBP8.98□□□□□ -0.97
DDX41-216ENST00000513562 HLA-DPB1P04440 258 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 DBHP09172 617 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 FPR3P25089 353 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 KIR2DS4P43632 304 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 RAP1BP61224 184 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 RAP1AP62834 184 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 AQP6Q13520 282 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 MPPED2Q15777 294 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 PRAMEF6Q5VXH4 476 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 C1orf122Q6ZSJ8 110 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 FUNDC1Q8IVP5 155 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 NKAIN4Q8IVV8 208 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 OR1F12Q8NHA8 337 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 PPP1R35Q8TAP8 253 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 TMEM239Q8WW34 195 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 APOBEC3DQ96AK3 386 aaPredicted RBP8.98□□□□□ -0.97
DDX41-216ENST00000513562 TAMM41Q96BW9 452 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 ECSITQ9BQ95 431 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 CNTD2Q9H8S5 307 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
DDX41-216ENST00000513562 RYR2Q92736 4967 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 K7EIL1 84 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 FBP2O00757 339 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 NDUFA2O43678 99 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 CCDC92Q53HC0 331 aaPredicted RBP8.97□□□□□ -0.97
DDX41-216ENST00000513562 INTS11Q5TA45 600 aaKnown RBP8.97□□□□□ -0.97
DDX41-216ENST00000513562 SFRP4Q6FHJ7 346 aaPredicted RBP8.97□□□□□ -0.97
DDX41-216ENST00000513562 BLOC1S3Q6QNY0 202 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 CCBE1Q6UXH8 406 aaPredicted RBP8.97□□□□□ -0.97
DDX41-216ENST00000513562 CALHM3Q86XJ0 350 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 LYG1Q8N1E2 194 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 LRRC75AQ8NAA5 344 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 OR4C13Q8NGP0 309 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 SPDL1Q96EA4 605 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 MMP28Q9H239 520 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 TRIM36Q9NQ86 728 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 UFSP2Q9NUQ7 469 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 RNF7Q9UBF6 113 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 RPUSD1Q9UJJ7 312 aaKnown RBP8.97□□□□□ -0.97
DDX41-216ENST00000513562 MED31Q9Y3C7 131 aa8.97□□□□□ -0.97
DDX41-216ENST00000513562 TRAV38-1A0A0B4J264 116 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 OOEPA6NGQ2 149 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 H7C1C5 153 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 DVL1O14640 695 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 NPFFO15130 113 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 RGS16O15492 202 aaPredicted RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 OR5F1O95221 314 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 PTBP3O95758 552 aaKnown RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 CRYBA2P53672 197 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 CTXN1P60606 82 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 LCN6P62502 163 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 GUCA2AQ02747 115 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 OR8B8Q15620 311 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 CYP51A1Q16850 503 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 NSUN5P1Q3KNT7 163 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 BEND6Q5SZJ8 279 aaPredicted RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 DLEU7Q6UYE1 221 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 PATL1Q86TB9 770 aaKnown RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 LY6G5BQ8NDX9 201 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 OR2T6Q8NHC8 308 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 ZNF583Q96ND8 569 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 PAIP2Q9BPZ3 127 aaKnown RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 HCAR1Q9BXC0 346 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 POLR2J2Q9GZM3 115 aaKnown RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 POLR2J3Q9H1A7 115 aaKnown RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 RANBP3Q9H6Z4 567 aaPredicted RBP8.96□□□□□ -0.98
DDX41-216ENST00000513562 WDR76Q9H967 626 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 FN3KRPQ9HA64 309 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 PLXNB1O43157 2135 aa8.96□□□□□ -0.98
DDX41-216ENST00000513562 TEX13CA0A0J9YWL9 993 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 RER1O15258 196 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 POLR3GO15318 223 aaPredicted RBP8.95□□□□□ -0.98
DDX41-216ENST00000513562 PAHP00439 452 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 GYPAP02724 150 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 EEF1B2P24534 225 aaKnown RBP8.95□□□□□ -0.98
DDX41-216ENST00000513562 SAA4P35542 130 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 PRSS12P56730 875 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 TAS2R41P59536 307 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 STX1BP61266 288 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
DDX41-216ENST00000513562 EMX1Q04741 257 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms