RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 CX3CR1P49238 355 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 GDI2P50395 445 aaKnown RBP11.85□□□□□ -0.51
RACK1-230ENST00000513060 ZNF83P51522 516 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 TPTEP56180 551 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 SORDQ00796 357 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 TIGD6Q17RP2 521 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 ZFP41Q8N8Y5 198 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 ZNF799Q96GE5 643 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 POM121L2Q96KW2 1035 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 MOV10Q9HCE1 1003 aaKnown RBP11.85□□□□□ -0.51
RACK1-230ENST00000513060 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 TRIM36Q9NQ86 728 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
RACK1-230ENST00000513060 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
RACK1-230ENST00000513060 NDRG3Q9UGV2 375 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 N6AMT1Q9Y5N5 214 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 ANKHD1Q8IWZ3 2542 aaKnown RBP11.85□□□□□ -0.51
RACK1-230ENST00000513060 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
RACK1-230ENST00000513060 PNMA8CA0A1B0GUJ8 204 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 J3QKU1 62 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 ACSM4P0C7M7 580 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 RNF224P0DH78 156 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SLC2A1P11166 492 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 SLC6A9P48067 706 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 MMP16P51512 607 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 NR1H2P55055 460 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 HGFACQ04756 655 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.51
RACK1-230ENST00000513060 MFGE8Q08431 387 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 ACSM1Q08AH1 577 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 ZNF829Q3KNS6 432 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 ARMCX4Q5H9R4 360 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SSX8Q7RTT4 187 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 HAVCR2Q8TDQ0 301 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 MUL1Q969V5 352 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 DOK1Q99704 481 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 FAM206AQ9NX38 181 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 NPAP1Q9NZP6 1156 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 GTF2A1LQ9UNN4 478 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SIRT4Q9Y6E7 314 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 R4GMQ9 66 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 TUBAL3A6NHL2 446 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 M0R1B8 84 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SRSF10O75494 262 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 APOC1P02654 83 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 CECR9P0C854 216 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 CELP19835 753 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 TGM4P49221 684 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 GP2P55259 537 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 TAS2R43P59537 309 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 NANOS3P60323 173 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 PSMA6P60900 246 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 MRPL28Q13084 256 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 TBC1D28Q2M2D7 210 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 CCDC58Q4VC31 144 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SYT6Q5T7P8 510 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 RPL22L1Q6P5R6 122 aaKnown RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 DRAM2Q6UX65 266 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 SEZ6L2Q6UXD5 910 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 PAQR4Q8N4S7 273 aaPredicted RBP11.84□□□□□ -0.51
RACK1-230ENST00000513060 OR2G2Q8NGZ5 317 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 PPP1R14AQ96A00 147 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 OPALINQ96PE5 141 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 ISYNA1Q9NPH2 558 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 FRRS1LQ9P0K9 344 aa11.84□□□□□ -0.51
RACK1-230ENST00000513060 TRBV2A0A0J9YWF9 115 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 LOC110117498-PIK3R3F6TDL0 507 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 ANXA2P07355 339 aaKnown RBP11.83□□□□□ -0.52
RACK1-230ENST00000513060 BDH1Q02338 343 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 ALKBH1Q13686 389 aaKnown RBP11.83□□□□□ -0.52
RACK1-230ENST00000513060 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
RACK1-230ENST00000513060 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 FDX2Q6P4F2 183 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 FAM57BQ71RH2 274 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 PRSS45Q7RTY3 260 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 PRSS35Q8N3Z0 413 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 OR1J2Q8NGS2 313 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 G6PC2Q9NQR9 355 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 ST6GALNAC2Q9UJ37 374 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 OR52A1Q9UKL2 312 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 SLC22A13Q9Y226 551 aa11.83□□□□□ -0.52
RACK1-230ENST00000513060 OGG1O15527 345 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 LCATP04180 440 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 RPL5P46777 297 aaKnown RBP11.82□□□□□ -0.52
RACK1-230ENST00000513060 SLC3A1Q07837 685 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 TPBGQ13641 420 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 CDK5R1Q15078 307 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 ZNF544Q6NX49 715 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 ARL9Q6T311 187 aa11.82□□□□□ -0.52
RACK1-230ENST00000513060 CATSPERDQ86XM0 798 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms