RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 MYO1DO94832 1006 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SUPT7LO94864 414 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 KLHL2O95198 593 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CLDN9O95484 217 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 TSPAN12O95859 305 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 IGHV3-9P01782 118 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SERPINA6P08185 405 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SNRPAP09012 282 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 NEFHP12036 1026 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 COX6A1P12074 109 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 BCKDHAP12694 445 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CALB2P22676 271 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ATP5A1P25705 553 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 GDF1P27539 372 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SSR2P43308 183 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SLCO1A2P46721 670 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SERPINB9P50453 376 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 LMO4P61968 165 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 REEP5Q00765 189 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 IFT88Q13099 833 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 NAB1Q13506 487 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ASAH1Q13510 395 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SLC25A25Q6KCM7 469 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 TMEM205Q6UW68 189 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 HACD2Q6Y1H2 254 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CYS1Q717R9 158 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CRLF3Q8IUI8 442 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CA13Q8N1Q1 262 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 KIF2BQ8N4N8 673 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CCNYL1Q8N7R7 359 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 PLPP5Q8NEB5 264 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CDC26Q8NHZ8 85 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 M1APQ8TC57 530 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 FNDC8Q8TC99 324 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 NT5CQ8TCD5 201 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ZPLD1Q8TCW7 415 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 THRSPQ92748 146 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 MCHR2Q969V1 340 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 C11orf24Q96F05 449 aaPredicted RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 CMTM7Q96FZ5 175 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 C1orf147Q96MC9 270 aaPredicted RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 JSRP1Q96MG2 331 aaPredicted RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 ZNF285Q96NJ3 590 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SIGLEC12Q96PQ1 595 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CCT8L2Q96SF2 557 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 EFCAB11Q9BUY7 163 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 OR8D2Q9GZM6 311 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ROGDIQ9GZN7 287 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 DEFB127Q9H1M4 99 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 OPN3Q9H1Y3 402 aaPredicted RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 CDC42EP4Q9H3Q1 356 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 RIBC2Q9H4K1 309 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 EXO5Q9H790 373 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ISG20L2Q9H9L3 353 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 AHSPQ9NZD4 102 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 SEC14L3Q9UDX4 400 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ZNF107Q9UII5 783 aaPredicted RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 PTBP2Q9UKA9 531 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 NPIPA1Q9UND3 350 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 RNF6Q9Y252 685 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 RNF11Q9Y3C5 154 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 GMPPBQ9Y5P6 360 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 MMP24Q9Y5R2 645 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 ZFC3H1O60293 1989 aaKnown RBP3.23□□□□□ -1.89
HTT-210ENST00000512909 IQANK1A0A1B0GTG1 560 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 KLRC4-KLRK1H3BQV0 150 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 IMPA2O14732 288 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 BCL2L11O43521 198 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 CTNSO60931 367 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 VENTXO95231 258 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 DIRAS3O95661 229 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 KLK1P06870 262 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 SLC35E2BP0CK96 405 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 CT45A10P0DMU9 189 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 ABOP16442 354 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 FUT1P19526 365 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 NT5EP21589 574 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 HMOX2P30519 316 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 RFC3P40938 356 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 CYB561P49447 251 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 SSR4P51571 173 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 LIM2P55344 173 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 RAB38P57729 211 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 RPL32P62910 135 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 PAX2Q02962 417 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 TMEM41BQ5BJD5 291 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 CFAP157Q5JU67 520 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 CDKL4Q5MAI5 379 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 KHDRBS2Q5VWX1 349 aaKnown RBP3.22□□□□□ -1.89
HTT-210ENST00000512909 ADNP2Q6IQ32 1131 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 NIPAL3Q6P499 406 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 SCIMPQ6UWF3 145 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 IGFL3Q6UXB1 125 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 HSDL2Q6YN16 418 aa3.22□□□□□ -1.89
HTT-210ENST00000512909 C16orf47Q6ZP98 133 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms