RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 RNF170Q96K19 258 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 FMO2Q99518 471 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ULBP2Q9BZM5 246 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 GBA3Q9H227 469 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 NXF3Q9H4D5 531 aaKnown RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 NHEJ1Q9H9Q4 299 aaPredicted RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 MRM3Q9HC36 420 aaKnown RBP3.42□□□□□ -1.86
CHD1-209ENST00000512844 OR2S2Q9NQN1 319 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 TMCO1Q9UM00 188 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 MEMO1Q9Y316 297 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ABCC1P33527 1531 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 MYOM1P52179 1685 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ADGRB2O60241 1585 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 ASTN1O14525 1302 aa3.42□□□□□ -1.86
CHD1-209ENST00000512844 MED14O60244 1454 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 THSD7BQ9C0I4 1608 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 IGHV3OR16-13A0A075B7E8 117 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 A0A1B0GW15 77 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 GOLGA8JA6NMD2 632 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 G3V4G9 280 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 H3BQV1 296 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 XRCC2O43543 280 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 DENRO43583 198 aaKnown RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 AIREO43918 545 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 MMP1P03956 469 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SERPINA6P08185 405 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 PET100P0DJ07 73 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 MLNP12872 115 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 BCKDHBP21953 392 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 GABRR2P28476 465 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 CTRLP40313 264 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 LEPP41159 167 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 TNFSF9P41273 254 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 PPOXP50336 477 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 HNRNPA3P51991 378 aaKnown RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 VSNL1P62760 191 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 ERVK-25P63136 954 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 ZNF33AQ06730 810 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 UNC119Q13432 240 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 MED21Q13503 144 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 AKIRIN2Q53H80 203 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SAMD4BQ5PRF9 694 aaKnown RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 REEP3Q6NUK4 255 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 FAM173BQ6P4H8 233 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 ENPP6Q6UWR7 440 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SSX6Q7RTT6 188 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SYS1Q8N2H4 156 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 OR4F6Q8NGB9 312 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 NUBPLQ8TB37 319 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SRSF12Q8WXF0 261 aaKnown RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 ACOT11Q8WXI4 607 aaPredicted RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 IL22RA2Q969J5 263 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 UBE2E3Q969T4 207 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 CPNE4Q96A23 557 aaPredicted RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 CCDC127Q96BQ5 260 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 OTUB2Q96DC9 234 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 CCDC126Q96EE4 140 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 ZNF641Q96N77 438 aaPredicted RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 CNN2Q99439 309 aaKnown RBP3.41□□□□□ -1.86
CHD1-209ENST00000512844 RASL11BQ9BPW5 248 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 KLHDC3Q9BQ90 382 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 NRIP2Q9BQI9 281 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SLC35A5Q9BS91 424 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 NAT9Q9BTE0 207 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 OR2AG1Q9H205 316 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SLC38A1Q9H2H9 487 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 NIPAL2Q9H841 368 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 ANKHQ9HCJ1 492 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 CD209Q9NNX6 404 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 TREX1Q9NSU2 369 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 URGCP-MRPS24S4R325 110 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 PPIP5K1Q6PFW1 1433 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 SSH2Q76I76 1423 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 MAP3K15Q6ZN16 1313 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 DEPDC5O75140 1603 aa3.41□□□□□ -1.86
CHD1-209ENST00000512844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.4□□□□□ -1.86
CHD1-209ENST00000512844 KIF1BO60333 1816 aa3.4□□□□□ -1.86
CHD1-209ENST00000512844 TRBV9A0A0B4J1U6 114 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 GOLGA8KD6RF30 607 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 PRAMEF26H0Y7S4 382 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 RAMP3O60896 148 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 FCN3O75636 299 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 CA1P00915 261 aaPredicted RBP3.4□□□□□ -1.87
CHD1-209ENST00000512844 ASS1P00966 412 aaKnown RBP3.4□□□□□ -1.87
CHD1-209ENST00000512844 RETP07949 1114 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 ATP6V1B2P21281 511 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 GCAP28676 217 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 NOS1P29475 1434 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 PPP1R2P41236 205 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 CSKP41240 450 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 GPR1P46091 355 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 RPS10P46783 165 aaKnown RBP3.4□□□□□ -1.87
CHD1-209ENST00000512844 DNASE1L1P49184 302 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 TAS2R19P59542 299 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 KLRB1Q12918 225 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 SLAMF1Q13291 335 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 C1orf61Q13536 156 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 TMED2Q15363 201 aa3.4□□□□□ -1.87
CHD1-209ENST00000512844 OR4D1Q15615 310 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms