RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 EIF1AYO14602 144 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 RAMP1O60894 148 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 TMCC2O75069 709 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CELP19835 753 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CFL1P23528 166 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CDKN1AP38936 164 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CD79BP40259 229 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 NAA10P41227 235 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 STARP49675 285 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CLRN1P58418 232 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 VBP1P61758 197 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 NCS1P62166 190 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 LCN6P62502 163 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 DYNC1I2Q13409 638 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 RNPS1Q15287 305 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 PDLIM3Q53GG5 364 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 C22orf34Q6ZV56 151 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF627Q7L945 461 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 DPY19L4Q7Z388 723 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 FAM220AQ7Z4H9 259 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 ADGRE4PQ86SQ3 457 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 KLBQ86Z14 1044 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 C20orf196Q8IYI0 205 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 KDM8Q8N371 416 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 OR51L1Q8NGJ5 315 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 RNF133Q8WVZ7 376 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 ABTB1Q969K4 478 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 MCHR2Q969V1 340 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 DNAJA3Q96EY1 480 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 KCTD7Q96MP8 289 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CENPOQ9BU64 300 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 MMP27Q9H306 513 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 PIGMQ9H3S5 423 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 NIPAL2Q9H841 368 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 TXNL4BQ9NX01 149 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 GLTPQ9NZD2 209 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 EMC3Q9P0I2 261 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 CYB5R1Q9UHQ9 305 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 LAMP5Q9UJQ1 280 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 MCTS1Q9ULC4 181 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 COA3Q9Y2R0 106 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 RPL36A-HNRNPH2H7BZ11 118 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF593O00488 134 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 CXCL13O43927 109 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 SERPINI2O75830 405 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 KRT8P05787 483 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 FCGR2AP12318 317 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 SRD5A1P18405 259 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 CSNK1A1P48729 337 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 MTNR1BP49286 362 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 CLDN17P56750 224 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 MRPS34P82930 218 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 SRYQ05066 204 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 RASGEF1BQ0VAM2 473 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 MOGQ16653 247 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 YIF1BQ5BJH7 314 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 LIPNQ5VXI9 398 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 UNQ9370/PRO34162Q6UXP9 181 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF704Q6ZNC4 412 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 FCRLAQ7L513 359 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 GPAT4Q86UL3 456 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 TPRA1Q86W33 373 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 WDFY1Q8IWB7 410 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 OR6N2Q8NGY6 317 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 OR52N5Q8NH56 324 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 NDNFQ8TB73 568 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 ST7LQ8TDW4 575 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 TRMT61AQ96FX7 289 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 SLCO5A1Q9H2Y9 848 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 GLRX2Q9NS18 164 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 PARPBPQ9NWS1 579 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 UGT2A1Q9Y4X1 527 aa9.14□□□□□ -0.95
PDLIM5-217ENST00000512274 IGKV1D-43A0A0B4J1Z2 117 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 IQCMA0A1B0GVH7 501 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ACOD1A6NK06 481 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 TMEM212A6NML5 194 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 PRR32B1ATL7 298 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 J3QLW9 94 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 GABRPO00591 440 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 HS3ST1O14792 307 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 NDUFS7O75251 213 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 SLC43A1O75387 559 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 SRSF10O75494 262 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 RGS9O75916 674 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF823P16415 610 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF19P17023 458 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 NPR2P20594 1047 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 EIF1AXP47813 144 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 MMP16P51512 607 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 RPS25P62851 125 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 HIST1H3AP68431 136 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 FABP5Q01469 135 aa9.13□□□□□ -0.95
PDLIM5-217ENST00000512274 ROR2Q01974 943 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms