RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ZNF670-ZNF695	F2Z2N8	137 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	MPV17	P39210	176 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	PSMB10	P40306	273 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	OR12D2	P58182	307 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	RAB40B	Q12829	278 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	POU4F2	Q12837	409 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	SNTB2	Q13425	540 aa	Known RBP	12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	TBC1D28	Q2M2D7	210 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	MST1L	Q2TV78	715 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	ALKBH6	Q3KRA9	238 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	VHLL	Q6RSH7	139 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC22A25	Q6T423	547 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	TMEM171	Q8WVE6	324 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	C14orf79	Q96F83	325 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	C4orf45	Q96LM5	186 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	KCNJ15	Q99712	375 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	COPS4	Q9BT78	406 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	CDH20	Q9HBT6	801 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	ERVK13-1	Q9NX77	482 aa		12.52	□□□□□ -0.41
MATR3-238	ENST00000512107	PTGES3L	E9PB15	166 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107		M0R135	149 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ICMT	O60725	284 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	TMCC2	O75069	709 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	CLPTM1	O96005	669 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	LALBA	P00709	142 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	CD8A	P01732	235 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	H2BFM	P0C1H6	154 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	CRHBP	P24387	322 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ATP6V1E1	P36543	226 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	CX3CR1	P49238	355 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	NR1H2	P55055	460 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	UCP2	P55851	309 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	RIPPLY3	P57055	190 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF121	P58317	390 aa	Predicted RBP	12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC35A2	P78381	396 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ST3GAL4	Q11206	333 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	CDON	Q4KMG0	1287 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	OR2G6	Q5TZ20	316 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ALDH16A1	Q8IZ83	802 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF786	Q8N393	782 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ACBD7	Q8N6N7	88 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF485	Q8NCK3	441 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	GTF3A	Q92664	365 aa	Known RBP	12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF799	Q96GE5	643 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	JAM3	Q9BX67	310 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	C1QTNF5	Q9BXJ0	243 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	DUSP21	Q9H596	190 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	NGB	Q9NPG2	151 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	BRD7	Q9NPI1	651 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ACOXL	Q9NUZ1	547 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	FAM206A	Q9NX38	181 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ATPIF1	Q9UII2	106 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	DIMT1	Q9UNQ2	313 aa	Known RBP	12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	N6AMT1	Q9Y5N5	214 aa		12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.51	□□□□□ -0.41
MATR3-238	ENST00000512107	ITPR3	Q14573	2671 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	DAPL1	A0PJW8	107 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CRYAA	P02489	173 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	MT-ND2	P03891	347 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	PIP	P12273	146 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CDH15	P55291	814 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	GALE	Q14376	348 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	IRF3	Q14653	427 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	HLX	Q14774	488 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	ADIPOQ	Q15848	244 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	XAF1	Q6GPH4	301 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	SSX8	Q7RTT4	187 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	KRT77	Q7Z794	578 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF679	Q8IYX0	411 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF283	Q8N7M2	679 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	NUP37	Q8NFH4	326 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	OR2AE1	Q8NHA4	323 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	ABHD4	Q8TB40	342 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC25A40	Q8TBP6	338 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	IGFBPL1	Q8WX77	278 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	RORB	Q92753	470 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	MARS2	Q96GW9	593 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	TMEM80	Q96HE8	168 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	LYZL4	Q96KX0	146 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	ALG8	Q9BVK2	526 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	UBTD1	Q9HAC8	227 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	G6PC2	Q9NQR9	355 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CISD1	Q9NZ45	108 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	PTTG3P	Q9NZH4	202 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CNOT2	Q9NZN8	540 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	IKZF2	Q9UKS7	526 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	SLC22A13	Q9Y226	551 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	CACNA1D	Q01668	2161 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	PLCE1	Q9P212	2302 aa		12.5	□□□□□ -0.41
MATR3-238	ENST00000512107	METTL15	A6NJ78	407 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107		J3QLW9	94 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	HS3ST1	O14792	307 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	LILRA1	O75019	489 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	RPP14	O95059	124 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	PTH	P01270	115 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	CDK1	P06493	297 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	SOD3	P08294	240 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF19	P17023	458 aa		12.49	□□□□□ -0.41
MATR3-238	ENST00000512107	PAX7	P23759	505 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms