RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ACSM4P0C7M7 580 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 ZNF823P16415 610 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 KITLGP21583 273 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 POU1F1P28069 291 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 TMEM33P57088 247 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 TNFAIP6P98066 277 aaPredicted RBP13.98□□□□□ -0.17
DDX41-213ENST00000512027 KRTAP27-1Q3LI81 207 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 FAM120AOSQ5T036 256 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 OR2Z1Q8NG97 314 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 OR6K6Q8NGW6 343 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 HPS1Q92902 700 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 HAVCR1Q96D42 359 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 ELMOD3Q96FG2 381 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 DCLRE1CQ96SD1 692 aaKnown RBP13.98□□□□□ -0.17
DDX41-213ENST00000512027 BEX2Q9BXY8 128 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 SHARPINQ9H0F6 387 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 CYSLTR2Q9NS75 346 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 WIPI2Q9Y4P8 454 aa13.98□□□□□ -0.17
DDX41-213ENST00000512027 C5orf63A6NC05 138 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 ARRDC5A6NEK1 342 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 RIIAD1A6NNX1 92 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 TIPRLO75663 272 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 ADH4P08319 380 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 SPARCP09486 303 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 RGS6P49758 472 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 LMO4P61968 165 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 CDK5R2Q13319 367 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 CR1LQ2VPA4 569 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 HFEQ30201 348 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 ACSM5Q6NUN0 579 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 FBXW12Q6X9E4 464 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 SPATC1Q76KD6 591 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 DCXRQ7Z4W1 244 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 LINC01356Q8N9X3 169 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 BHLHE23Q8NDY6 225 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 OR10AD1Q8NGE0 317 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 PTP4A1Q93096 173 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 APOBEC3DQ96AK3 386 aaPredicted RBP13.97□□□□□ -0.17
DDX41-213ENST00000512027 OTULINQ96BN8 352 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 C1QTNF5Q9BXJ0 243 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 CMC2Q9NRP2 79 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 TMEM160Q9NX00 188 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 CGGBP1Q9UFW8 167 aaPredicted RBP13.97□□□□□ -0.17
DDX41-213ENST00000512027 ZDHHC8Q9ULC8 765 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 BAIAP2Q9UQB8 552 aa13.97□□□□□ -0.17
DDX41-213ENST00000512027 IGHV3-64DA0A0J9YX35 117 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 CLDN25C9JDP6 229 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 H0YL77 283 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 CD55P08174 381 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 RAC2P15153 192 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 FMO3P31513 532 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 GRK5P34947 590 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 LIPAP38571 399 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 SLC25A1P53007 311 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 GK3PQ14409 553 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 GINS1Q14691 196 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 ZMAT1Q5H9K5 638 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 LINC01590Q5TEZ4 76 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 COLCA1Q6ZS62 124 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 PAPD5Q8NDF8 572 aaKnown RBP13.96□□□□□ -0.17
DDX41-213ENST00000512027 ITLN1Q8WWA0 313 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 C1orf159Q96HA4 380 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 COG8Q96MW5 612 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 MDFIQ99750 246 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 EGLN1Q9GZT9 426 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 DNAJB9Q9UBS3 223 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 KCNG2Q9UJ96 466 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 COL6A5A8TX70 2615 aa13.96□□□□□ -0.17
DDX41-213ENST00000512027 IFNGP01579 166 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 LCATP04180 440 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 FAM157CP0CG43 387 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 ZNF3P17036 446 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 TUBG1P23258 451 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 ENTPD1P49961 510 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 SNAI3Q3KNW1 292 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 TMEM236Q5W0B7 351 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 OR5L1Q8NGL2 311 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 DIRC2Q96SL1 478 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 ZNF665Q9H7R5 613 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 TUBG2Q9NRH3 451 aa13.95□□□□□ -0.18
DDX41-213ENST00000512027 ARHGAP32A7KAX9 2087 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 ISPDA4D126 451 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 J3QW42 95 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 M0R135 149 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 ZNF593O00488 134 aaPredicted RBP13.94□□□□□ -0.18
DDX41-213ENST00000512027 MLNRO43193 412 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 SLC2A1P11166 492 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 SLC6A9P48067 706 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 PRKXP51817 358 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 TPTEP56180 551 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 ECH1Q13011 328 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 GK2Q14410 553 aaPredicted RBP13.94□□□□□ -0.18
DDX41-213ENST00000512027 SLC27A4Q6P1M0 643 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 ERI1Q8IV48 349 aaKnown RBP13.94□□□□□ -0.18
DDX41-213ENST00000512027 ATG16L2Q8NAA4 619 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 OR8G5Q8NG78 346 aa13.94□□□□□ -0.18
DDX41-213ENST00000512027 OR2AE1Q8NHA4 323 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms