RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 SLC25A14O95258 325 aaPredicted RBP3.17□□□□□ -1.9
MBD4-209ENST00000511009 ETHE1O95571 254 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 TCP1P17987 556 aaKnown RBP3.17□□□□□ -1.9
MBD4-209ENST00000511009 RAB3AP20336 220 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 RAB5AP20339 215 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CFHR2P36980 270 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CSNK1A1P48729 337 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CCR6P51684 374 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CCNG1P51959 295 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CLDN6P56747 220 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CDH17Q12864 832 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 ERCC8Q13216 396 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 DGCR6Q14129 220 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 RCAN2Q14206 197 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CAPRIN1Q14444 709 aaKnown RBP3.17□□□□□ -1.9
MBD4-209ENST00000511009 METTL21CQ5VZV1 264 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 SLC25A25Q6KCM7 469 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 DNAJC24Q6P3W2 148 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 FAM58AQ8N1B3 248 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 KIF2BQ8N4N8 673 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 MDS2Q8NDY4 140 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 DUSP18Q8NEJ0 188 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 OR13C9Q8NGT0 318 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 FAM131CQ96AQ9 280 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 NRBF2Q96F24 287 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 BMFQ96LC9 184 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 WFIKKN1Q96NZ8 548 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 ZNF317Q96PQ6 595 aaPredicted RBP3.17□□□□□ -1.9
MBD4-209ENST00000511009 TM6SF2Q9BZW4 377 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 STMN4Q9H169 189 aaPredicted RBP3.17□□□□□ -1.9
MBD4-209ENST00000511009 PRSS16Q9NQE7 514 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 NEU3Q9UQ49 428 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 TOPBP1Q92547 1522 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 SOGA1O94964 1423 aa3.17□□□□□ -1.9
MBD4-209ENST00000511009 IGHV3-64DA0A0J9YX35 117 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 PINLYPA6NC86 204 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 H7C417 338 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 KDELR3O43731 214 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 DCNP07585 359 aaKnown RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 CD3GP09693 182 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 RHOXF2BP0C7M4 288 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 USF1P22415 310 aaPredicted RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 CASQ1P31415 396 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 HCAR3P49019 387 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 ZNF136P52737 540 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 RPS23P62266 143 aaKnown RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 ARG2P78540 354 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 SLC39A6Q13433 755 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 C5orf64Q2M2E5 130 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 RSPO1Q2MKA7 263 aaPredicted RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 CHRFAM7AQ494W8 412 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 C6orf183Q5T699 404 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 WDR82Q6UXN9 313 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 SLC35D2Q76EJ3 337 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 NPWQ8N729 165 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 OR10AD1Q8NGE0 317 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 RNF138Q8WVD3 245 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 CIDECQ96AQ7 238 aaPredicted RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 TM4SF18Q96CE8 201 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 RHOXF2Q9BQY4 288 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 IFI27L2Q9H2X8 130 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 MYOZ1Q9NP98 299 aaPredicted RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 ZMAT5Q9UDW3 170 aaKnown RBP3.16□□□□□ -1.9
MBD4-209ENST00000511009 MTFP1Q9UDX5 166 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 OR12D3Q9UGF7 316 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 NOTCH3Q9UM47 2321 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 CCDC88BA6NC98 1476 aa3.16□□□□□ -1.9
MBD4-209ENST00000511009 IGHV3-66A0A0C4DH42 116 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 HACD1B0YJ81 288 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 H3BN98 237 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 NVLO15381 856 aaKnown RBP3.15□□□□□ -1.91
MBD4-209ENST00000511009 CATP04040 527 aaKnown RBP3.15□□□□□ -1.91
MBD4-209ENST00000511009 KLK1P06870 262 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 GFAPP14136 432 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 FABP6P51161 128 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 ZNF133P52736 654 aaPredicted RBP3.15□□□□□ -1.91
MBD4-209ENST00000511009 AP1S2P56377 157 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 GTF3C1Q12789 2109 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 C2orf83Q53S99 150 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 FBXO48Q5FWF7 155 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 FBXW12Q6X9E4 464 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 OR2W3Q7Z3T1 314 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 PCP2Q8IVA1 136 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 OR11H7Q8NGC8 314 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 ZNF596Q8TC21 504 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 ABHD3Q8WU67 409 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 MRGPRFQ96AM1 343 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 DCPSQ96C86 337 aaKnown RBP3.15□□□□□ -1.91
MBD4-209ENST00000511009 RCN3Q96D15 328 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 UQCC2Q9BRT2 126 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 TMEM175Q9BSA9 504 aa3.15□□□□□ -1.91
MBD4-209ENST00000511009 SPNS1Q9H2V7 528 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms