RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 C12orf4Q9NQ89 552 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 NECAP2Q9NVZ3 263 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 MYEF2Q9P2K5 600 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 GNG12Q9UBI6 72 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 STOML2Q9UJZ1 356 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 RAB26Q9ULW5 256 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ERGIC3Q9Y282 383 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 POLDIP2Q9Y2S7 368 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 TSSC4Q9Y5U2 329 aaPredicted RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 PKD1L3Q7Z443 1732 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 THSD7AQ9UPZ6 1657 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 COL14A1Q05707 1796 aaKnown RBP2.97□□□□□ -1.93
NUP54-209ENST00000510569 CCDC171Q6TFL3 1326 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 NUP188Q5SRE5 1749 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ATRNO75882 1429 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 A0A0J9YVX5 310 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 GNG14A0A1W2PPG7 69 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 TMEM238C9JI98 176 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CLDN34H7C241 214 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 M0R3G1 203 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 KMOO15229 486 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SIVA1O15304 175 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 STX10O60499 249 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ENTPD5O75356 428 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 DEXIO95424 95 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SLC2A10O95528 541 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 DHFRP00374 187 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 APOEP02649 317 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SERPINA5P05154 406 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CYP11B1P15538 503 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 TSPAN8P19075 237 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 PSMB5P28074 263 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CD1CP29017 333 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 UGT2B10P36537 528 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CD79BP40259 229 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CSKP41240 450 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 NPY2RP49146 381 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 RGS6P49758 472 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 RPL14P50914 215 aaKnown RBP2.97□□□□□ -1.93
NUP54-209ENST00000510569 EFNB2P52799 333 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ATP1B3P54709 279 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 KCNJ2P63252 427 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 GRB7Q14451 532 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SLC15A2Q16348 729 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 NDUFA5Q16718 116 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 GUK1Q16774 197 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CHRFAM7AQ494W8 412 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SLC36A2Q495M3 483 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 VPS26BQ4G0F5 336 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR2G6Q5TZ20 316 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ACOT1Q86TX2 421 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 APRG1Q8IVJ8 170 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 FUNDC1Q8IVP5 155 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 BOD1L2Q8IYS8 172 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 LRRC75AQ8NAA5 344 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR2AP1Q8NGE2 309 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR6M1Q8NGM8 313 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR4A4PQ8NGN8 299 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR1L6Q8NGR2 347 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 OR1F12Q8NHA8 337 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 CDS1Q92903 461 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 S100PBPQ96BU1 408 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 PACRGQ96M98 296 aaPredicted RBP2.97□□□□□ -1.93
NUP54-209ENST00000510569 ZFP3Q96NJ6 502 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SLC38A2Q96QD8 506 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 MBOAT4Q96T53 435 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 PRRT1Q99946 306 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 DCUN1D5Q9BTE7 237 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 RACGAP1Q9H0H5 632 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SYT4Q9H2B2 425 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 KIR3DX1Q9H7L2 352 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 HRASLSQ9HDD0 168 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 VCX3AQ9NNX9 186 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 PRSS16Q9NQE7 514 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ZC4H2Q9NQZ6 224 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 BATF3Q9NR55 127 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 UVRAGQ9P2Y5 699 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 MIOXQ9UGB7 285 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 ANAPC7Q9UJX3 599 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 NXT1Q9UKK6 140 aaKnown RBP2.97□□□□□ -1.93
NUP54-209ENST00000510569 NPIPA1Q9UND3 350 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 WIF1Q9Y5W5 379 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 LAMA4Q16363 1823 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 SPEF2Q9C093 1822 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 C5P01031 1676 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 LAMB4A4D0S4 1761 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 RGPD3A6NKT7 1758 aaPredicted RBP2.97□□□□□ -1.93
NUP54-209ENST00000510569 RGPD4Q7Z3J3 1758 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 UBR2Q8IWV8 1755 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 PAPPAQ13219 1627 aa2.97□□□□□ -1.93
NUP54-209ENST00000510569 TJP1Q07157 1748 aa2.96□□□□□ -1.93
NUP54-209ENST00000510569 SBF2Q86WG5 1849 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 A0A0A6YYD4 124 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 A0A1W2PQL4 384 aaPredicted RBP2.96□□□□□ -1.94
NUP54-209ENST00000510569 EFCAB10A6NFE3 127 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 SAGE2PA6NJ88 616 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 YJEFN3A6XGL0 299 aa2.96□□□□□ -1.94
NUP54-209ENST00000510569 DYNC1I1O14576 645 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms