RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 FBXL19Q6PCT2 694 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PRSS54Q6PEW0 395 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 LANCL3Q6ZV70 420 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 MON1AQ86VX9 555 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 KRTCAP2Q8N6L1 136 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 RBMXL3Q8N7X1 1067 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 FADS6Q8N9I5 356 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR1P1Q8NH06 330 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR4F5Q8NH21 305 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR1L1Q8NH94 360 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ORAOV1Q8WV07 137 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TMIGD2Q96BF3 282 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR4F4Q96R69 305 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 FEVQ99581 238 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PDCD2LQ9BRP1 358 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DHRS4Q9BTZ2 278 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 GABARAPL3Q9BY60 117 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SLC17A9Q9BYT1 436 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SAP30LQ9HAJ7 183 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DLL4Q9NR61 685 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ZMIZ1Q9ULJ6 1067 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 IFITM5A6NNB3 132 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 YDJCA8MPS7 323 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 E5RJQ4 531 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PROB1E7EW31 1015 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GPR37O15354 613 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 CDC14BO60729 498 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ADAMTS4O75173 837 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 CRYBA1P05813 215 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC35E2BP0CK96 405 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FOLR2P14207 255 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 GOT1P17174 413 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC6A11P48066 632 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 EMP2P54851 167 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TROAPQ12815 778 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MRPL58Q14197 206 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 PAFAH1B3Q15102 231 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 PCBP2Q15366 365 aaKnown RBP eCLIP3.27□□□□□ -1.89
USP53-205ENST00000509769 TESK1Q15569 626 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TECRLQ5HYJ1 363 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF770Q6IQ21 691 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 TRAT1Q6PIZ9 186 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FIGLAQ6QHK4 219 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMIGD1Q6UXZ0 262 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TPRG1Q6ZUI0 275 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 BHLHA15Q7RTS1 189 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 OR2W3Q7Z3T1 314 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEFF1Q8IYR6 380 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 NANOGP1Q8N7R0 232 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 Q8N9G6 341 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 ZMIZ2Q8NF64 920 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR4A16Q8NH70 328 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR51E1Q8TCB6 317 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 LCN9Q8WX39 176 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLAMF6Q96DU3 332 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 UBXN10Q96LJ8 280 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TAAR6Q96RI8 345 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 MIEN1Q9BRT3 115 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 C16orf70Q9BSU1 422 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FAM103A1Q9BTL3 118 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 C20orf24Q9BUV8 137 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEM126AQ9H061 195 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 P2RY12Q9H244 342 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PRO1933Q9H354 126 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 PELI2Q9HAT8 420 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SLC23A2Q9UGH3 650 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 COX11Q9Y6N1 276 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 COL2A1P02458 1487 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3KA0A087X1G2 549 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3BA6NDS4 549 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3FA6NER0 549 aaPredicted RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 C9J4A7 227 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 SCAMP2O15127 329 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 COCHO43405 550 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 LRP3O75074 770 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 FAM155BO75949 473 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 NDUFB6O95139 128 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 POP4O95707 220 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 IL4P05112 153 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 EIF4EP06730 217 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 INHBBP09529 407 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 IRF2P14316 349 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 BCL3P20749 454 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TACR2P21452 398 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 HOXA6P31267 233 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ARRB2P32121 409 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 P2RY1P47900 373 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 DLX1P56177 255 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 OR1D5P58170 312 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TMEM258P61165 79 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 UFM1P61960 85 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 LCN2P80188 198 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 EFEMP1Q12805 493 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TARBP2Q15633 366 aaKnown RBP3.27□□□□□ -1.89
USP53-205ENST00000509769 SMIM21Q3B7S5 101 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 ZNF528Q3MIS6 628 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 LYSMD4Q5XG99 296 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 C18orf63Q68DL7 685 aa3.27□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3GQ6DHY5 549 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms