RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DUSP13Q9UII6 198 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 ITGB1BP2Q9UKP3 347 aa7.87□□□□□ -1.15
NUP54-207ENST00000508583 USF3Q68DE3 2245 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 RTTNQ86VV8 2226 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 IGLV3-9A0A075B6K5 115 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 CASQ2O14958 399 aaPredicted RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 SLC16A6O15403 523 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 CD8AP01732 235 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 IGHV3-13P01766 116 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 H2BFMP0C1H6 154 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 SELEP16581 610 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 CFL1P23528 166 aaKnown RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 PEX2P28328 305 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 POLR2IP36954 125 aaKnown RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 WNT5AP41221 380 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 DSCR9P59020 149 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 ACTC1P68032 377 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 ACTA1P68133 377 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 EFNB1P98172 346 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 IL18R1Q13478 541 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 SNCBQ16143 134 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 LRRC36Q1X8D7 754 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 PCGF3Q3KNV8 242 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 KRTAP27-1Q3LI81 207 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 OGFRL1Q5TC84 451 aaPredicted RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 AADACL4Q5VUY2 407 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 DEGS2Q6QHC5 323 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 ZNF101Q8IZC7 436 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 GALNT4Q8N4A0 578 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 BBS1Q8NFJ9 593 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 ST7LQ8TDW4 575 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 THEM6Q8WUY1 208 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 RNF133Q8WVZ7 376 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 NEU4Q8WWR8 484 aaPredicted RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 PERPQ96FX8 193 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 MAP6Q96JE9 813 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 DIRC2Q96SL1 478 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 KCNJ15Q99712 375 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 SLC29A1Q99808 456 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 ABHD6Q9BV23 337 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 C1QTNF5Q9BXJ0 243 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 MROQ9BYG7 248 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 OR51B6Q9H340 312 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 PNRC2Q9NPJ4 139 aaKnown RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 FAM118AQ9NWS6 357 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 CLN6Q9NWW5 311 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 NOP16Q9Y3C1 178 aaKnown RBP7.86□□□□□ -1.15
NUP54-207ENST00000508583 PCDHGB1Q9Y5G3 927 aa7.86□□□□□ -1.15
NUP54-207ENST00000508583 CCDC182A6NF36 153 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 TIMM8AO60220 97 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 SELENOFO60613 162 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ZNF254O75437 659 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 LCATP04180 440 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ACSM4P0C7M7 580 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 RAC2P15153 192 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 OTX1P32242 354 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 NAA10P41227 235 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 MTNR1AP48039 350 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 EFNA4P52798 201 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 OCLNQ16625 522 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 Q5PR19 223 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 OTPQ5XKR4 325 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 CLEC2AQ6UVW9 174 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 SPNS3Q6ZMD2 512 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 COLCA1Q6ZS62 124 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 RFPL4BQ6ZWI9 263 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 KRT77Q7Z794 578 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 DHRSXQ8N5I4 330 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ZNF283Q8N7M2 679 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 OR52H1Q8NGJ2 320 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 SLC25A40Q8TBP6 338 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 KLF14Q8TD94 323 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 ZNRF4Q8WWF5 429 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 CYGBQ8WWM9 190 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ITFG2Q969R8 447 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 MARS2Q96GW9 593 aaKnown RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 ZNF582Q96NG8 517 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 MBOAT4Q96T53 435 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 DOK1Q99704 481 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 VRK1Q99986 396 aaPredicted RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 MRPL37Q9BZE1 423 aaKnown RBP7.85□□□□□ -1.15
NUP54-207ENST00000508583 OR2J1Q9GZK6 312 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 RGCCQ9H4X1 137 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 TAAR3PQ9P1P4 343 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ZNF391Q9UJN7 358 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 HSPE1-MOB4S4R3N1 261 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 ARFGEF3Q5TH69 2177 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 MYO9AB2RTY4 2548 aa7.85□□□□□ -1.15
NUP54-207ENST00000508583 IRGMA1A4Y4 181 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ACOD1A6NK06 481 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 E9PQ18 207 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ZNF670-ZNF695F2Z2N8 137 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 H0YAE9 185 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 H0YJX3 145 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 M0R129 80 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 XRCC2O43543 280 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 F12P00748 615 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms