RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 COL7A1Q02388 2944 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 NUP210LQ5VU65 1888 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 A0A0D9SEW6 157 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 H0YCG3 227 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CCER2I3L3R5 266 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 SS18L1O75177 396 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 VPS26AO75436 327 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 ZMPSTE24O75844 475 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 TNNC2P02585 160 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 MRPL3P09001 348 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CCNB1P14635 433 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 PGCP20142 388 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 UQCRC2P22695 453 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CCNHP51946 323 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CYP24A1Q07973 514 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 ADIGQ0VDE8 80 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 DEFB113Q30KQ7 82 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 C5orf47Q569G3 176 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 GPR157Q5UAW9 335 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 ATL3Q6DD88 541 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 TMIGD1Q6UXZ0 262 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 DPY19L4Q7Z388 723 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 TAC4Q86UU9 113 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 FANK1Q8TC84 345 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 RAPGEF5Q92565 580 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CCDC127Q96BQ5 260 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 DNAJC19Q96DA6 116 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 SPXQ9BT56 116 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 TM6SF2Q9BZW4 377 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 UCK2Q9BZX2 261 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 CCL28Q9NRJ3 127 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 FARSAQ9Y285 508 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 SNX10Q9Y5X0 201 aa2.68□□□□□ -1.98
TOPBP1-206ENST00000508524 ROS1P08922 2347 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 RYR2Q92736 4967 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 LRRIQ3A6PVS8 624 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 LANCL1O43813 399 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SLC19A2O60779 497 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 PFKFB2O60825 505 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 OR4F21O95013 312 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 TNFP01375 233 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 UGT2B4P06133 528 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 PPIAL4GP0DN37 164 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 FOLR1P15328 257 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 CXCR2P25025 360 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 PTGDSP41222 190 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 DLX1P56177 255 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 DAOAP59103 153 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 INCA1Q0VD86 236 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SNTB2Q13425 540 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SNRNP35Q16560 246 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 C1orf220Q5T0J3 134 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SYPL2Q5VXT5 272 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 RAET1GQ6H3X3 334 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SYT10Q6XYQ8 523 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF683Q8IZ20 524 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 RPRMLQ8N4K4 120 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 ZADH2Q8N4Q0 377 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF709Q8N972 641 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 OR56A4Q8NGH8 313 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 OR9G1Q8NH87 305 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 RNF139Q8WU17 664 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 PHF10Q8WUB8 498 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 CNDP1Q96KN2 507 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 FCRL1Q96LA6 429 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 C9orf72Q96LT7 481 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SPIN2AQ99865 258 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SPIN2BQ9BPZ2 258 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 CDC42EP4Q9H3Q1 356 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 DYRK4Q9NR20 520 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 NUDT15Q9NV35 164 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 AIPL1Q9NZN9 384 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 MEMO1Q9Y316 297 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 ALG6Q9Y672 507 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 SACSQ9NZJ4 4579 aa2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 PHF3Q92576 2039 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-206ENST00000508524 IGHV5-51A0A0C4DH38 117 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF233A6NK53 670 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 KLF7O75840 302 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 TM7SF2O76062 418 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 LCA5LO95447 670 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 ASS1P00966 412 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 IGLV3-25P01717 112 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 TNNI1P19237 187 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 FGF9P31371 208 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 RORAP35398 523 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 KIR2DS4P43632 304 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 DEFA6Q01524 100 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 GOLGA7BQ2TAP0 167 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 LRRC8BQ6P9F7 803 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 RUFY3Q7L099 469 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 UNC93AQ86WB7 457 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 ARHGAP18Q8N392 663 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF557Q8N988 423 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 DNAAF3Q8N9W5 541 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 UBA3Q8TBC4 463 aa2.66□□□□□ -1.98
TOPBP1-206ENST00000508524 SYAP1Q96A49 352 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms