RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 OTPQ5XKR4 325 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 USP51Q70EK9 711 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 RHOUQ7L0Q8 258 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 TMEM179BQ7Z7N9 219 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 PARP8Q8N3A8 854 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 OR9Q1Q8NGQ5 310 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 RAB1CQ92928 201 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 YIPF5Q969M3 257 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 MSI2Q96DH6 328 aaKnown RBP16.91■□□□□ 0.3
SFXN1-209ENST00000508290 DUS3LQ96G46 650 aaKnown RBP16.91■□□□□ 0.3
SFXN1-209ENST00000508290 PRRG3Q9BZD7 231 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 PNRC2Q9NPJ4 139 aaKnown RBP16.91■□□□□ 0.3
SFXN1-209ENST00000508290 ABCA1O95477 2261 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 RTTNQ86VV8 2226 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 PRODHO43272 600 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 LMX1BO60663 402 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 CIB2O75838 187 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 ZNF16P17020 682 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 HNF1AP20823 631 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 POU1F1P28069 291 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 SLC15A1P46059 708 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 TNFAIP6P98066 277 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 DRAM2Q6UX65 266 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 PEG10Q86TG7 708 aaKnown RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 LINC01356Q8N9X3 169 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 OR6K6Q8NGW6 343 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 UTP4Q969X6 686 aaKnown RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 ZNF582Q96NG8 517 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 PAPOLBQ9NRJ5 636 aaKnown RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 IL19Q9UHD0 177 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 ENOPH1Q9UHY7 261 aa16.9■□□□□ 0.3
SFXN1-209ENST00000508290 NOP16Q9Y3C1 178 aaKnown RBP16.9■□□□□ 0.3
SFXN1-209ENST00000508290 LRP5LA4QPB2 252 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 B4DSR2 109 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 PRR23D1E9PI22 279 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-209ENST00000508290 F5H5K5 113 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 IFNL4K9M1U5 179 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 M0R135 149 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 APOC1P02654 83 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 SPARCP09486 303 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 PRR23D2P0DMB1 279 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-209ENST00000508290 FASP25445 335 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 OTX1P32242 354 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-209ENST00000508290 CDK5Q00535 292 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 GINS1Q14691 196 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 ATP6AP1Q15904 470 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 TMEM255AQ5JRV8 349 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 FAHD1Q6P587 224 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 SHFQ7M4L6 423 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 DCXRQ7Z4W1 244 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 OR51L1Q8NGJ5 315 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 OR13G1Q8NGZ3 307 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 OR5K1Q8NHB7 308 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF799Q96GE5 643 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 PLEKHA8Q96JA3 519 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 TOR3AQ9H497 397 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 SP140LQ9H930 580 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 NTN4Q9HB63 628 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 SLC25A19Q9HC21 320 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 MSL2Q9HCI7 577 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 PTTG3PQ9NZH4 202 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 AP4S1Q9Y587 144 aa16.89■□□□□ 0.29
SFXN1-209ENST00000508290 TVP23AA6NH52 213 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 IQCF6A8MYZ5 107 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF878C9JN71 531 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF593O00488 134 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-209ENST00000508290 CDC14BO60729 498 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 TIPRLO75663 272 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 GLCEO94923 617 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 TGFAP01135 160 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 IFNA2P01563 188 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 LCATP04180 440 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 ANPEPP15144 967 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 GSTT1P30711 240 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 CDH15P55291 814 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 ESRRGP62508 458 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 GRB2P62993 217 aaKnown RBP16.88■□□□□ 0.29
SFXN1-209ENST00000508290 TRIP10Q15642 601 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 RSPO1Q2MKA7 263 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-209ENST00000508290 LINC01590Q5TEZ4 76 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 IQCF1Q8N6M8 205 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 OR8G5Q8NG78 346 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 INTS14Q96SY0 518 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 COPS4Q9BT78 406 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 POFUT1Q9H488 388 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 WDR76Q9H967 626 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 MARCH7Q9H992 704 aa16.88■□□□□ 0.29
SFXN1-209ENST00000508290 ABCA2Q9BZC7 2435 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 GYPBP06028 91 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 TAF13Q15543 124 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 SLC35D3Q5M8T2 416 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 ZDHHC13Q8IUH4 622 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF454Q8N9F8 522 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF511Q8NB15 262 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 OR2Z1Q8NG97 314 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 CLDND2Q8NHS1 167 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 ZNRF4Q8WWF5 429 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms