RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 SPATS1Q496A3 300 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 DCAF12L2Q5VW00 463 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
RAB28-205ENST00000508274 LYPD4Q6UWN0 246 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 FBXW12Q6X9E4 464 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 PEG10Q86TG7 708 aaKnown RBP12.04□□□□□ -0.48
RAB28-205ENST00000508274 NAA40Q86UY6 237 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 ZNRF4Q8WWF5 429 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
RAB28-205ENST00000508274 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 A0A0G2JMP0 313 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 A0A0X1KG70 313 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 MLNRO43193 412 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 IDH3BO43837 385 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 KRT36O76013 467 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 GASTP01350 101 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ACSM4P0C7M7 580 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 TNFRSF1AP19438 455 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ANOS1P23352 680 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ZFP36P26651 326 aaKnown RBP12.03□□□□□ -0.48
RAB28-205ENST00000508274 SEC61A1P61619 476 aaKnown RBP12.03□□□□□ -0.48
RAB28-205ENST00000508274 ZMYND11Q15326 602 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 COLCA1Q6ZS62 124 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 SEMA6DQ8NFY4 1073 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 OR4M2Q8NGB6 313 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 OR52L1Q8NGH7 329 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 OR51L1Q8NGJ5 315 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ZNF420Q8TAQ5 688 aaPredicted RBP12.03□□□□□ -0.48
RAB28-205ENST00000508274 NSL1Q96IY1 281 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 MAP6Q96JE9 813 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 DDOQ99489 341 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 PITX2Q99697 317 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 ATF6BQ99941 703 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 CYB5R1Q9UHQ9 305 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 PPP1R3CQ9UQK1 317 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 U3KQV3 271 aa12.03□□□□□ -0.48
RAB28-205ENST00000508274 TVP23AA6NH52 213 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 F5H5K5 113 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 EPHA1P21709 976 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 MMP16P51512 607 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 MNAT1P51948 309 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 BTG1P62324 171 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 MS4A2Q01362 244 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 TRAP1Q12931 704 aaKnown RBP12.02□□□□□ -0.49
RAB28-205ENST00000508274 ZNF362Q5T0B9 420 aaPredicted RBP12.02□□□□□ -0.49
RAB28-205ENST00000508274 LCN8Q6JVE9 175 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 AQP11Q8NBQ7 271 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 OR5L1Q8NGL2 311 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 OR10S1Q8NGN2 331 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 OR9Q1Q8NGQ5 310 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 OR2AJ1Q8NGZ0 328 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 CDADC1Q9BWV3 514 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 TRIM15Q9C019 465 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 GCM1Q9NP62 436 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 IL20Q9NYY1 176 aa12.02□□□□□ -0.49
RAB28-205ENST00000508274 IQCF6A8MYZ5 107 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 F5H5P2 479 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 CCNB2O95067 398 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SOX14O95416 240 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 T-ENOLP0DO92 83 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SELEP16581 610 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SLC36A3Q495N2 470 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 C1QL2Q7Z5L3 287 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 DHFR2Q86XF0 187 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SLC37A3Q8NCC5 494 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 PROKR2Q8NFJ6 384 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 OR4Q3Q8NH05 313 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 CLPTM1LQ96KA5 538 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 MEGF10Q96KG7 1140 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 MAGIXQ9H6Y5 334 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 TBC1D23Q9NUY8 699 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 OPN4Q9UHM6 478 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 PCDHB10Q9UN67 800 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SURF4O15260 269 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 ZNF205O95201 554 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 CYB5R3P00387 301 aaPredicted RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 HLA-DPB1P04440 258 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 GYPBP06028 91 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 TRIM25Q14258 630 aaKnown RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 GK2Q14410 553 aaPredicted RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 TMEM155Q4W5P6 130 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 RPL13AP3Q6NVV1 102 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 LRRC28Q86X40 367 aaPredicted RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 KLHL36Q8N4N3 616 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 OR13G1Q8NGZ3 307 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 CCDC124Q96CT7 223 aaKnown RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 PATZ1Q9HBE1 687 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms