RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PSKH1P11801 424 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 HSD11B1P28845 292 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
RNF4-210ENST00000508235 SLC6A9P48067 706 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 DSCR9P59020 149 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 POU4F2Q12837 409 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 ZMAT1Q5H9K5 638 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 SPATA46Q5T0L3 261 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 TGIF2LYQ8IUE0 185 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
RNF4-210ENST00000508235 THEM6Q8WUY1 208 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 RNF133Q8WVZ7 376 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 ZNF799Q96GE5 643 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
RNF4-210ENST00000508235 MNTQ99583 582 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 SP140LQ9H930 580 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
RNF4-210ENST00000508235 HAO2Q9NYQ3 351 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 TAAR3PQ9P1P4 343 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 GMPPBQ9Y5P6 360 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 TACC2O95359 2948 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 H0YHG0 523 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 SSX4O60224 188 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 CLPTM1O96005 669 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 LCATP04180 440 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 RAC2P15153 192 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 HTR1FP30939 366 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
RNF4-210ENST00000508235 ALDH3B1P43353 468 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 MALLQ13021 153 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 CLEC12BQ2HXU8 276 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
RNF4-210ENST00000508235 SLC25A30Q5SVS4 291 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
RNF4-210ENST00000508235 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 ZNF555Q8NEP9 628 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 WFDC11Q8NEX6 87 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 ASB17Q8WXJ9 295 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 Q96MF0 132 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 MBOAT4Q96T53 435 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 VCXQ9H320 206 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
RNF4-210ENST00000508235 STARD10Q9Y365 291 aa12.85□□□□□ -0.35
RNF4-210ENST00000508235 E9PQ18 207 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 PHYHO14832 338 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 TIMM8AO60220 97 aaPredicted RBP12.84□□□□□ -0.35
RNF4-210ENST00000508235 NDUFS7O75251 213 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 H2BFMP0C1H6 154 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 SELEP16581 610 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 ALOX5APP20292 161 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 MPV17P39210 176 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
RNF4-210ENST00000508235 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
RNF4-210ENST00000508235 LRRC36Q1X8D7 754 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 PCGF3Q3KNV8 242 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 LPCAT4Q643R3 524 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
RNF4-210ENST00000508235 HAVCR1Q96D42 359 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 APOL4Q9BPW4 351 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 NIPAL2Q9H841 368 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 FAM118AQ9NWS6 357 aa12.84□□□□□ -0.35
RNF4-210ENST00000508235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF4-210ENST00000508235 LOC100130705A0A1B0GUX0 176 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 C17orf100A8MU93 164 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
RNF4-210ENST00000508235 SLC16A6O15403 523 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
RNF4-210ENST00000508235 KITLGP21583 273 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 PEX2P28328 305 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 OPRL1P41146 370 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 CX3CR1P49238 355 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 PRKXP51817 358 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 PSG7Q13046 419 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 OCLNQ16625 522 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 DEGS2Q6QHC5 323 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 SPATC1Q76KD6 591 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 KRT77Q7Z794 578 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 GALNT4Q8N4A0 578 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 ZNF283Q8N7M2 679 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 CMBLQ96DG6 245 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 Q96MT0 163 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
RNF4-210ENST00000508235 DIRC2Q96SL1 478 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 RHNO1Q9BSD3 238 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 MROQ9BYG7 248 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 OPA3Q9H6K4 179 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 NKIRAS2Q9NYR9 191 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 PTTG3PQ9NZH4 202 aa12.83□□□□□ -0.36
RNF4-210ENST00000508235 PURGQ9UJV8 347 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms