RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 REG4Q9BYZ8 158 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 SLC26A1Q9H2B4 701 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 ASH2LQ9UBL3 628 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 C19orf25Q9UFG5 118 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 CYB5R1Q9UHQ9 305 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 NCOA6Q14686 2063 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 TNRC6BQ9UPQ9 1833 aaKnown RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 IGHV1-45A0A0A0MS14 117 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 H7C417 338 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 L7N2F9 121 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 TRAF3IP2O43734 574 aaPredicted RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 F10P00742 488 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 TTRP02766 147 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 IL5P05113 134 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 GTF2F2P13984 249 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 PCK2Q16822 640 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 DNM1P34Q6PK57 102 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 ACBD4Q8NC06 268 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 OR51S1Q8NGJ8 323 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 RBPMSQ93062 196 aaKnown RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 B3GNT4Q9C0J1 378 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 CHST6Q9GZX3 395 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 ZNF160Q9HCG1 818 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 RDH8Q9NYR8 311 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 MTFP1Q9UDX5 166 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 POLR1DQ9Y2S0 133 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 KLK3P07288 261 aaPredicted RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 COX6A1P12074 109 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 NFYAP23511 347 aaPredicted RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 RAB14P61106 215 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
DDX41-208ENST00000507955 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 B3GALT1Q9Y5Z6 326 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
DDX41-208ENST00000507955 POM121CA8CG34 1229 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 HSPB2A8KAH6 182 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 SULT2B1O00204 365 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 RLN1P04808 185 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 LAP3P28838 519 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 RAP2BP61225 183 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 HSPB2Q16082 182 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 NAA40Q86UY6 237 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 OR51E1Q8TCB6 317 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 LINC00052Q96N35 136 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 DMRTA2Q96SC8 542 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 GINS4Q9BRT9 223 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 MRI1Q9BV20 369 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 GDF2Q9UK05 429 aaPredicted RBP12.86□□□□□ -0.35
DDX41-208ENST00000507955 SLC5A6Q9Y289 635 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 SNRPGP15A8MWD9 76 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 M0QYG6 137 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
DDX41-208ENST00000507955 AQP8O94778 261 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 QDPRP09417 244 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 ABOP16442 354 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 ZNF43P17038 809 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 PBOV1Q9GZY1 135 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 CNTD2Q9H8S5 307 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 PROK2Q9HC23 129 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
DDX41-208ENST00000507955 KNTC1P50748 2209 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 TMEM235A6NFC5 223 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 E9PLN8 166 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 SMAD9O15198 467 aaKnown RBP12.85□□□□□ -0.35
DDX41-208ENST00000507955 ARPC5O15511 151 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 LDOC1O95751 146 aaPredicted RBP12.85□□□□□ -0.35
DDX41-208ENST00000507955 CSN2P05814 226 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 MSX1P28360 303 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 PRSS3P35030 304 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 CLDN17P56750 224 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 IL11RAQ14626 422 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 HLXQ14774 488 aaPredicted RBP12.85□□□□□ -0.35
DDX41-208ENST00000507955 TOMM20Q15388 145 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
DDX41-208ENST00000507955 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms