RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 U2AF2P26368 475 aaKnown RBP eCLIP1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 TGFBR2P37173 567 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 EIF1P41567 113 aaKnown RBP1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 CRYBB2P43320 205 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 SIGLEC14Q08ET2 396 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 KLHL12Q53G59 568 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 MBOAT1Q6ZNC8 495 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 CSGALNACT2Q8N6G5 542 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 CCDC126Q96EE4 140 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 TSGA13Q96PP4 275 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 SLC29A1Q99808 456 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 SEC22CQ9BRL7 303 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 CHCHD7Q9BUK0 85 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 NUP50Q9UKX7 468 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 TICRRQ7Z2Z1 1910 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 A0A0J9YXV3 536 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR6C70A6NIJ9 312 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 J3QKU1 62 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 K7EMT4 169 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 KLHL41O60662 606 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 PLIN3O60664 434 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 FKBP6O75344 327 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 ASGR1P07306 291 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 PFN1P07737 140 aaKnown RBP1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 CD99P14209 185 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 ATF6P18850 670 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 RBM34P42696 430 aaKnown RBP1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 RPS23P62266 143 aaKnown RBP1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 ELF3P78545 371 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 GPM6BQ13491 265 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 ZNF266Q14584 549 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 PRSS54Q6PEW0 395 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 WDR59Q6PJI9 974 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 DEGS2Q6QHC5 323 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 CHST4Q8NCG5 386 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR4M1Q8NGD0 313 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR1J4Q8NGS1 313 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 PHOSPHO2Q8TCD6 241 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 TMEM230Q96A57 120 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 TUBGCP3Q96CW5 907 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 STACQ99469 402 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 SLC39A3Q9BRY0 314 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 NEUROG2Q9H2A3 272 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 TMEM27Q9HBJ8 222 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 RHBDL2Q9NX52 303 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 SUN2Q9UH99 717 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 R4GN34 69 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 THADAQ6YHU6 1953 aa1.16□□□□□ -2.22
HMGB1P29-201ENST00000505659 IGHV1-69DA0A0B4J2H0 117 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 BICDL2A1A5D9 508 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 NCBP2LA6PVI3 153 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 C4orf51C9J302 202 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 C3orf84H3BNL1 204 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 RAB29O14966 203 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 EIF4E2O60573 245 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 SERPINB7O75635 380 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 INAFM2P0DMQ5 153 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 TMED10P49755 219 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 CRISP1P54107 249 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 ADARB1P78563 741 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 BST2Q10589 180 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 NCF4Q15080 339 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 TMEM150AQ86TG1 271 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 GPR151Q8TDV0 419 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 KIFAP3Q92845 792 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 GPR82Q96P67 336 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 PKMYT1Q99640 499 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 CSNK1G1Q9HCP0 422 aa1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 CSDC2Q9Y534 153 aaKnown RBP1.15□□□□□ -2.23
HMGB1P29-201ENST00000505659 H7C1H1 209 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 PALMO75781 387 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 CST1P01037 141 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 ANXA5P08758 320 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 MCF2P10911 925 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 TCP1P17987 556 aaKnown RBP1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 POLR2IP36954 125 aaKnown RBP1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 MPV17P39210 176 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 ARFIP1P53367 373 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 CDH6P55285 790 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 KRTAP12-1P59990 96 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 PPIDQ08752 370 aaKnown RBP1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 CHIT1Q13231 466 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 DGCR6Q14129 220 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 VPS26BQ4G0F5 336 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 PPM1LQ5SGD2 360 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 UBE2UQ5VVX9 321 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 H3F3CQ6NXT2 135 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 MRPL55Q7Z7F7 128 aaKnown RBP1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR52E2Q8NGJ4 325 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 GHSRQ92847 366 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 EEF1AKMT3Q96AZ1 226 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 ZBED3Q96IU2 234 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 C18orf15Q96N68 181 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 TMEM243Q9BU79 118 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR51M1Q9H341 326 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 ZNF492Q9P255 531 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 STARD10Q9Y365 291 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 ADGRA3Q8IWK6 1321 aa1.14□□□□□ -2.23
HMGB1P29-201ENST00000505659 IGKV1-27A0A075B6S5 117 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 SMKR1H3BMG3 65 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms