RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ANAPC10Q9UM13 185 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 SLC5A6Q9Y289 635 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 TEX13DA0A0J9YY54 714 aaPredicted RBP13.37□□□□□ -0.27
SNF8-203ENST00000504000 MS4A18H0YCH9 400 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 NAT1P18440 290 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 MS4A18Q3C1V0 323 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 OTPQ5XKR4 325 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 OR10K2Q6IF99 312 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 CD163Q86VB7 1156 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 TMEM185AQ8NFB2 350 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 ELP5Q8TE02 316 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 ZNF75AQ96N20 296 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 ZMAT3Q9HA38 289 aaKnown RBP13.37□□□□□ -0.27
SNF8-203ENST00000504000 TMEM100Q9NV29 134 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
SNF8-203ENST00000504000 ADAM10O14672 748 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 SIGLEC6O43699 453 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 CRHP06850 196 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 H2BFMP0C1H6 154 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 NME1P15531 152 aaKnown RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 PSMB6P28072 239 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 DEFA5Q01523 94 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ZP2Q05996 745 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 UNC119Q13432 240 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 FAM189A2Q15884 450 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 C9orf50Q5SZB4 431 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 C10orf91Q5T1B1 145 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ELP2Q6IA86 826 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 C17orf107Q6ZR85 190 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 TTLL10Q6ZVT0 673 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 RHOUQ7L0Q8 258 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 HOGA1Q86XE5 327 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ARMC10Q8N2F6 343 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ACBD4Q8NC06 268 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 OR1M1Q8NGA1 313 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 OR5AP2Q8NGF4 316 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 OR5D14Q8NGL3 314 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 PIK3IP1Q96FE7 263 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 SEC22AQ96IW7 307 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 KLF2Q9Y5W3 355 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 CDH23Q9H251 3354 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 TMEM218A2RU14 115 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 TMEM14DPA8MWL7 114 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 SOX1O00570 391 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 MPZL1O95297 269 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 WISP1O95388 367 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 NKPD1Q17RQ9 610 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 SVBPQ8N300 66 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 ARRDC1Q8N5I2 433 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 TGM7Q96PF1 710 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 NKX3-1Q99801 234 aaPredicted RBP13.36□□□□□ -0.27
SNF8-203ENST00000504000 NRSN2Q9GZP1 204 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 NDRG3Q9UGV2 375 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 PCDHB10Q9UN67 800 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 PRELID3BQ9Y3B1 194 aa13.36□□□□□ -0.27
SNF8-203ENST00000504000 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 CDC14CA4D256 554 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 NPIPA5E9PKD4 350 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 ZNF208O43345 1280 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 TTRP02766 147 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 IFNA6P05013 189 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 GSTP1P09211 210 aaKnown RBP13.35□□□□□ -0.27
SNF8-203ENST00000504000 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 LYL1P12980 280 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
SNF8-203ENST00000504000 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
SNF8-203ENST00000504000 OR1D4P47884 311 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 GFERP55789 205 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 SUMO3P55854 103 aaPredicted RBP13.35□□□□□ -0.27
SNF8-203ENST00000504000 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 VAX1Q5SQQ9 334 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 OR4K17Q8NGC6 315 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 OR10R2Q8NGX6 335 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 FGGYQ96C11 551 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 GAL3ST1Q99999 423 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 CHMP1AQ9HD42 196 aaPredicted RBP13.35□□□□□ -0.27
SNF8-203ENST00000504000 KLHL13Q9P2N7 655 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 MBD2Q9UBB5 411 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 NPIPA1Q9UND3 350 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 CYP8B1Q9UNU6 501 aa13.35□□□□□ -0.27
SNF8-203ENST00000504000 ANKUB1A6NFN9 424 aa13.34□□□□□ -0.27
SNF8-203ENST00000504000 EPOPA6NHQ4 379 aa13.34□□□□□ -0.27
SNF8-203ENST00000504000 OR2AT4A6NND4 320 aa13.34□□□□□ -0.27
SNF8-203ENST00000504000 P2RY10O00398 339 aa13.34□□□□□ -0.27
SNF8-203ENST00000504000 CCSO14618 274 aa13.34□□□□□ -0.27
SNF8-203ENST00000504000 GMFGO60234 142 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms