RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 OR2T29Q8NH02 315 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 GNPDA2Q8TDQ7 276 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 HAVCR1Q96D42 359 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 RPRD1BQ9NQG5 326 aaKnown RBP18.65■□□□□ 0.58
LSM6-203ENST00000503982 TMEM106BQ9NUM4 274 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 B9D1Q9UPM9 204 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 PPP1R3CQ9UQK1 317 aa18.65■□□□□ 0.58
LSM6-203ENST00000503982 ERFP50548 548 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 HLXQ14774 488 aaPredicted RBP18.64■□□□□ 0.57
LSM6-203ENST00000503982 SLC36A3Q495N2 470 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 C1orf146Q5VVC0 180 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 OR2T2Q6IF00 324 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 Q6ZR03 302 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 LINC00346Q8IVM7 164 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 SPICQ8N5J4 248 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 SDR9C7Q8NEX9 313 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 APOBEC3DQ96AK3 386 aaPredicted RBP18.64■□□□□ 0.57
LSM6-203ENST00000503982 SLCO4A1Q96BD0 722 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 HDHD2Q9H0R4 259 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 FN3KQ9H479 309 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 ARMC1Q9NVT9 282 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 DCAF16Q9NXF7 216 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 ATPIF1Q9UII2 106 aa18.64■□□□□ 0.57
LSM6-203ENST00000503982 A0A0A6YYJ9 748 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 ARRDC5A6NEK1 342 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 DCTN6O00399 190 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 CIB2O75838 187 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 VENTXO95231 258 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 RAC2P15153 192 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 HIST1H1CP16403 213 aaKnown RBP18.63■□□□□ 0.57
LSM6-203ENST00000503982 ADRA2CP18825 462 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 FPR3P25089 353 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 KCNMB1Q16558 191 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 KLHL36Q8N4N3 616 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.63■□□□□ 0.57
LSM6-203ENST00000503982 OR52L1Q8NGH7 329 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 OR2V2Q96R30 315 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 PITX2Q99697 317 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 COQ7Q99807 217 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 TMPRSS13Q9BYE2 586 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 C7orf69Q9H7B7 122 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 IL19Q9UHD0 177 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 LHFPL6Q9Y693 200 aa18.63■□□□□ 0.57
LSM6-203ENST00000503982 J3QLI3 93 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 FKBP6O75344 327 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 FOXH1O75593 365 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 AVPP01185 164 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 RBMXP38159 391 aaKnown RBP18.62■□□□□ 0.57
LSM6-203ENST00000503982 ACTR3P61158 418 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 ACTG1P63261 375 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 SLC35F1Q5T1Q4 408 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 ZNF770Q6IQ21 691 aaPredicted RBP18.62■□□□□ 0.57
LSM6-203ENST00000503982 C12orf54Q6X4T0 127 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 OR6V1Q8N148 313 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 BHLHE23Q8NDY6 225 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 OR52E2Q8NGJ4 325 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 NANPQ8TBE9 248 aa18.62■□□□□ 0.57
LSM6-203ENST00000503982 ZNF582Q96NG8 517 aaPredicted RBP18.62■□□□□ 0.57
LSM6-203ENST00000503982 IGLV1-36A0A0B4J1U3 117 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 J3QW42 95 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 TNFRSF11BO00300 401 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 ARPC3O15145 178 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 IGHV2-70P01814 119 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 GATA3P23771 443 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.61■□□□□ 0.57
LSM6-203ENST00000503982 DBPQ10586 325 aaPredicted RBP18.61■□□□□ 0.57
LSM6-203ENST00000503982 CLEC12AQ5QGZ9 265 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 SLC27A4Q6P1M0 643 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 C1QL2Q7Z5L3 287 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 BPIFB2Q8N4F0 458 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 OR10AD1Q8NGE0 317 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 RAB3IPQ96QF0 476 aaPredicted RBP18.61■□□□□ 0.57
LSM6-203ENST00000503982 HCAR1Q9BXC0 346 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 REEP1Q9H902 201 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 WDR76Q9H967 626 aa18.61■□□□□ 0.57
LSM6-203ENST00000503982 F5H5K5 113 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 CST1P01037 141 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 ZNF823P16415 610 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 GSSP48637 474 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 BTG1P62324 171 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 TSPAN31Q12999 210 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 C1orf229Q6ZS94 237 aaPredicted RBP18.6■□□□□ 0.57
LSM6-203ENST00000503982 ZNF283Q8N7M2 679 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 OR8G5Q8NG78 346 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 OR13G1Q8NGZ3 307 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 EGLN3Q9H6Z9 239 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 DNAJB9Q9UBS3 223 aa18.6■□□□□ 0.57
LSM6-203ENST00000503982 IGHV3-64DA0A0J9YX35 117 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 IDH3BO43837 385 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 LCATP04180 440 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 SRP9P49458 86 aaKnown RBP18.59■□□□□ 0.57
LSM6-203ENST00000503982 COX10Q12887 443 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 MALLQ13021 153 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 PGBD2Q6P3X8 592 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 FBXW12Q6X9E4 464 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 ZNF620Q6ZNG0 422 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 PROKR2Q8NFJ6 384 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 SLC26A10Q8NG04 563 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 OR9Q2Q8NGE9 314 aa18.59■□□□□ 0.57
LSM6-203ENST00000503982 ZNF420Q8TAQ5 688 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms