RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 YAP1P46937 504 aaKnown RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 SLC9A3P48764 834 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 PRKCDQ05655 676 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 MAB21L1Q13394 359 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 CLEC12AQ5QGZ9 265 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 FAM122BQ7Z309 247 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 TBC1D15Q8TC07 691 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 Q8TCH9 128 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 TSPEARQ8WU66 669 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 APOBEC3DQ96AK3 386 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 TPD52L3Q96J77 140 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 ZNF570Q96NI8 536 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 SYT4Q9H2B2 425 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 RERGLQ9H628 205 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 ACOXLQ9NUZ1 547 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 KIF17Q9P2E2 1029 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 ATPIF1Q9UII2 106 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 COA3Q9Y2R0 106 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 J3KTA2 159 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 XKRYO14609 159 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 SLC16A7O60669 478 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 CD14P08571 375 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 IRF2P14316 349 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 FPR3P25089 353 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 GPR4P46093 362 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 RAD23AP54725 363 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 LSM6P62312 80 aaKnown RBP12.17□□□□□ -0.46
TRAF4-212ENST00000498540 CYLC2Q14093 348 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-212ENST00000498540 MPPED2Q15777 294 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 ANKDD1AQ495B1 522 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 GLB1L2Q8IW92 636 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 OFCC1Q8IZS5 231 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 FAM156AQ8NDB6 213 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 WDFY2Q96P53 400 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 ECSITQ9BQ95 431 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 SMURF1Q9HCE7 757 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 TMEM100Q9NV29 134 aa12.17□□□□□ -0.46
TRAF4-212ENST00000498540 IGHV1-69DA0A0B4J2H0 117 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 FFAR1O14842 300 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 AHCYL1O43865 530 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 IFNA14P01570 189 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 IGHV1-69P01742 117 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 IER3P46695 156 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 NPY4RP50391 375 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 KRR1Q13601 381 aaKnown RBP12.16□□□□□ -0.46
TRAF4-212ENST00000498540 SFRP4Q6FHJ7 346 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-212ENST00000498540 ERICH5Q6P6B1 374 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 TBPL2Q6SJ96 375 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 Q6ZSV7 163 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 LDLRAD3Q86YD5 345 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 OR8J3Q8NGG0 315 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 OR11L1Q8NGX0 322 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 STON2Q8WXE9 905 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 LHX4Q969G2 390 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 TRIM15Q9C019 465 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 SIRPDQ9H106 197 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 POLR1DQ9Y2S0 133 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
TRAF4-212ENST00000498540 TET2Q6N021 2002 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 A0A087WUU8 490 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 FCN3O75636 299 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 KDELR2P33947 212 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 CD200P41217 278 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 HIST1H3AP68431 136 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 TRAM2Q15035 370 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 MEP1BQ16820 701 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ZBED5Q49AG3 693 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 FBLN7Q53RD9 439 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 HIST2H3PS2Q5TEC6 136 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 METTL11BQ5VVY1 283 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 CD276Q5ZPR3 534 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 CORO6Q6QEF8 472 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 HIST2H3AQ71DI3 136 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 VTCN1Q7Z7D3 282 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 PDZD9Q8IXQ8 264 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 BOLLQ8N9W6 283 aaKnown RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ACOT11Q8WXI4 607 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 COQ7Q99807 217 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 SH3GL1Q99961 368 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 FNDC11Q9BVV2 318 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 HCAR1Q9BXC0 346 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 HDHD2Q9H0R4 259 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 NMNAT1Q9HAN9 279 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ERVK-18Q9QC07 812 aa12.15□□□□□ -0.46
TRAF4-212ENST00000498540 ELOVL7A1L3X0 281 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 ADAM20O43506 726 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms