RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PROCRQ9UNN8 238 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 TIMM10BQ9Y5J6 103 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 E9PLN8 166 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 SGCEO43556 437 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 SC5DO75845 299 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 ATE1O95260 518 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
VPS26A-209ENST00000497564 PSMA6P60900 246 aaKnown RBP12.39□□□□□ -0.43
VPS26A-209ENST00000497564 TGFBR3Q03167 851 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 SLC3A1Q07837 685 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 SLC36A2Q495M3 483 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 ZNF808Q8N4W9 903 aaPredicted RBP12.39□□□□□ -0.43
VPS26A-209ENST00000497564 IL17RDQ8NFM7 739 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 HSD17B8Q92506 261 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 GHSRQ92847 366 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 KCNJ15Q99712 375 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 ATF6BQ99941 703 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 CHCHD6Q9BRQ6 235 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 MOB1AQ9H8S9 216 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
VPS26A-209ENST00000497564 LOC100506127A0A0U1RQW1 187 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 OR6C6A6NF89 314 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 PRSS44E7EML9 344 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 GABRPO00591 440 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 SYNGR3O43761 229 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 RGS9O75916 674 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-209ENST00000497564 ZFPL1O95159 310 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 PNPP00491 289 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 SERPINA3P01011 423 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 APOC1P02654 83 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 NR4A1P22736 598 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 HSD11B1P28845 292 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 OPRM1P35372 400 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 UGT2B10P36537 528 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 NCS1P62166 190 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 PSG4Q00888 419 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 FABP5Q01469 135 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 P2RY6Q15077 328 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 TAF13Q15543 124 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 YIF1BQ5BJH7 314 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM91Q6ZNR0 172 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 ZNF433Q8N7K0 673 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-209ENST00000497564 FGFBP3Q8TAT2 258 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
VPS26A-209ENST00000497564 CENPOQ9BU64 300 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 TMED9Q9BVK6 235 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 OR2H1Q9GZK4 316 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 G6PC2Q9NQR9 355 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 TXNL4BQ9NX01 149 aaKnown RBP12.38□□□□□ -0.43
VPS26A-209ENST00000497564 FAM206AQ9NX38 181 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 PLEK2Q9NYT0 353 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
VPS26A-209ENST00000497564 CSMD2Q7Z408 3487 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 LOC110117498-PIK3R3F6TDL0 507 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 DOK2O60496 412 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 GATBO75879 557 aaKnown RBP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 UBL3O95164 117 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 COX5BP10606 129 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 CRYGSP22914 178 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 ARR3P36575 388 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 VBP1P61758 197 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 RPS11P62280 158 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 MFGE8Q08431 387 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 SPCS2Q15005 226 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 C9orf135Q5VTT2 229 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM53Q6P2H8 277 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 MTFR2Q6P444 385 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 PAMR1Q6UXH9 720 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 USP43Q70EL4 1123 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 KBTBD8Q8NFY9 601 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 OR5AK2Q8NH90 309 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 NANOS1Q8WY41 292 aaKnown RBP12.37□□□□□ -0.43
VPS26A-209ENST00000497564 PHYHIPQ92561 330 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 THRSPQ92748 146 aa12.37□□□□□ -0.43
VPS26A-209ENST00000497564 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms