RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 RBFOX2O43251 390 aaKnown RBP eCLIP2.74□□□□□ -1.97
VPS36-206ENST00000497149 ZNF207O43670 478 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 CDH16O75309 829 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 GCM2O75603 506 aaPredicted RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 YIF1AO95070 293 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 IVLP07476 585 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 CD3GP09693 182 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 GTF2E2P29084 291 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 SSTR5P35346 364 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 RPS15P62841 145 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 MRPS15P82914 257 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 PGGHGQ32M88 737 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 SPANXN2Q5MJ10 180 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 TTC23LQ6PF05 361 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 CLEC2AQ6UVW9 174 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 TMEM205Q6UW68 189 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 NPSR1Q6W5P4 371 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 SCD5Q86SK9 330 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 SYCE1Q8N0S2 351 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 NPWQ8N729 165 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 LYPD6BQ8NI32 183 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 COQ8AQ8NI60 647 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 NUBPLQ8TB37 319 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 PIFOQ8TCI5 191 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 DDI1Q8WTU0 396 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 CDKL2Q92772 493 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 RBMXL1Q96E39 390 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 ZNF382Q96SR6 550 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 RSPO3Q9BXY4 272 aaPredicted RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 SIRT7Q9NRC8 400 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 CD300AQ9UGN4 299 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 TRMT112Q9UI30 125 aaKnown RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 CBY1Q9Y3M2 126 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 RFNGQ9Y644 331 aa2.74□□□□□ -1.97
VPS36-206ENST00000497149 COL22A1Q8NFW1 1626 aaPredicted RBP2.74□□□□□ -1.97
VPS36-206ENST00000497149 OR6C74A6NCV1 312 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 DNALI1O14645 258 aaPredicted RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 SCAMP2O15127 329 aaKnown RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 HUS1O60921 280 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 NIPSNAP2O75323 286 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 ARG1P05089 322 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 EIF4EP06730 217 aaKnown RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 CT45A6P0DMU7 189 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CT45A5P0DMU8 189 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CT45A7P0DMV0 189 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 ATF6P18850 670 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 RAB3AP20336 220 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 BCKDHBP21953 392 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 DTYMKP23919 212 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 NPY1RP25929 384 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 MAGEA1P43355 309 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 SYKP43405 635 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CRISP1P54107 249 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 TRAM2Q15035 370 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 HSDL1Q3SXM5 330 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CT45A1Q5HYN5 189 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 LIN9Q5TKA1 542 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 GPR107Q5VW38 600 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 BZW1Q7L1Q6 419 aaKnown RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 LUZP2Q86TE4 346 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CD302Q8IX05 232 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 TCAIMQ8N3R3 496 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 ZNF561Q8N587 486 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 DNAAF3Q8N9W5 541 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 OR10AD1Q8NGE0 317 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 OR8U1Q8NH10 309 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 CT45A3Q8NHU0 189 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 TMEM230Q96A57 120 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 NARS2Q96I59 477 aaKnown RBP2.73□□□□□ -1.97
VPS36-206ENST00000497149 TIMM17AQ99595 171 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 PTTG3PQ9NZH4 202 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 EMC3Q9P0I2 261 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 ZNF835Q9Y2P0 537 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 C15orf41Q9Y2V0 281 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 TNS2Q63HR2 1409 aa2.73□□□□□ -1.97
VPS36-206ENST00000497149 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 A0A1B0GW55 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 SERTM2A0A1B0GWG4 89 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 ERICH2A1L162 156 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 PTPRTO14522 1441 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 SULT1B1O43704 296 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 RDH16O75452 317 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 APCSP02743 223 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 CTSLP07711 333 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 OR56A5P0C7T3 313 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 LINC00869P0C866 280 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 ZNF286BP0CG31 522 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4L2P0CJ85 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4L3P0CJ86 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4L5P0CJ88 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4L6P0CJ89 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4L7P0CJ90 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 HCAR3P49019 387 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 MRPL19P49406 292 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 P2RX1P51575 399 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 MERTKQ12866 999 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 COTL1Q14019 142 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 IL18Q14116 193 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms