RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 OR5AK2Q8NH90 309 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 TFAP2CQ92754 450 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 TECTBQ96PL2 329 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ABHD6Q9BV23 337 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ANKRD60Q9BZ19 345 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 TOXO94900 526 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 NAAAQ02083 359 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PLAURQ03405 335 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF684Q5T5D7 378 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 RPL22L1Q6P5R6 122 aaKnown RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 FAM122BQ7Z309 247 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 LHFPL3Q86UP9 236 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 DMRTC2Q8IXT2 367 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 RELL2Q8NC24 303 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 FUZQ9BT04 418 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 RTL8AQ9BWD3 113 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PAK1IP1Q9NWT1 392 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ASH1LQ9NR48 2969 aaKnown RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 TMEM212A6NML5 194 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 HLA-DPB1P04440 258 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 IGFBP1P08833 259 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 DBTP11182 482 aaKnown RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF26P17031 533 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PCSK6P29122 969 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 GLRXP35754 106 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 RPRMLQ8N4K4 120 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 KLHDC3Q9BQ90 382 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 TMEM100Q9NV29 134 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 OR52A1Q9UKL2 312 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 SELENOFO60613 162 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 HCKP08631 526 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 PIPP12273 146 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 OR8G1Q15617 311 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 TSC22D1Q15714 1073 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 SLC25A30Q5SVS4 291 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 PLXDC2Q6UX71 529 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF367Q7RTV3 350 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 TSEN54Q7Z6J9 526 aaKnown RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 TSPAN14Q8NG11 270 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 OR13C3Q8NGS6 347 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 CNIH3Q8TBE1 160 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 MARVELD3Q96A59 401 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 BORCS8Q96FH0 119 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 FAM71F1Q96KD3 344 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 WFIKKN1Q96NZ8 548 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 OR8B4Q96RC9 309 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 CACNA1DQ01668 2161 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ITGA5P08648 1049 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ATP1B3P54709 279 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 CORO6Q6QEF8 472 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 NCCRP1Q6ZVX7 275 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 CCL19Q99731 98 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 GPA33Q99795 319 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 PAPOLGQ9BWT3 736 aaKnown RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 DIMT1Q9UNQ2 313 aaKnown RBP7.53□□□□□ -1.2
U2AF1-212ENST00000496462 R4GMQ9 66 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 SPG11Q96JI7 2443 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 IGLV1-36A0A0B4J1U3 117 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ADAM10O14672 748 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 CSF3P09919 207 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 DCTDP32321 178 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 WNT4P56705 351 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 HIST2H2BCQ6DN03 193 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 UGT2A3Q6UWM9 527 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 LRRN1Q6UXK5 716 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 ENTHD1Q8IYW4 607 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 SEMA6DQ8NFY4 1073 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 OR5D14Q8NGL3 314 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 OR52N1Q8NH53 320 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 PLCXD1Q9NUJ7 323 aa7.53□□□□□ -1.2
U2AF1-212ENST00000496462 A6NNC1 897 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 RER1O15258 196 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 CSTBP04080 98 aaKnown RBP7.52□□□□□ -1.2
U2AF1-212ENST00000496462 ACHEP22303 614 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 THBS2P35442 1172 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 POLR2IP36954 125 aaKnown RBP7.52□□□□□ -1.2
U2AF1-212ENST00000496462 SERPINF1P36955 418 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 UCP2P55851 309 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 DAZAP2Q15038 168 aaPredicted RBP7.52□□□□□ -1.2
U2AF1-212ENST00000496462 CCDC58Q4VC31 144 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 TP53I3Q53FA7 332 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 ADAM5Q6NVV9 412 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 GPR141Q7Z602 305 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 NAXEQ8NCW5 288 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 BABAM2Q9NXR7 383 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 PTTG3PQ9NZH4 202 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 TAAR3PQ9P1P4 343 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 SLC25A15Q9Y619 301 aa7.52□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF407Q9C0G0 2248 aa7.52□□□□□ -1.21
U2AF1-212ENST00000496462 SLC1A7O00341 560 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms