RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ACOXLQ9NUZ1 547 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 ICE1Q9Y2F5 2266 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 HEATR1Q9H583 2144 aaKnown RBP16.87■□□□□ 0.29
ATG3-208ENST00000495756 IGHV2OR16-5A0A0B4J2B6 119 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 M0R135 149 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 MYL12BO14950 172 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 TACSTD2P09758 323 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ACSM4P0C7M7 580 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ZNF35P13682 527 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 DCTDP32321 178 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 TPTEP56180 551 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 HGFACQ04756 655 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 BSPH1Q075Z2 132 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 LIPNQ5VXI9 398 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ZNF773Q6PK81 442 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 NANOGP1Q8N7R0 232 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 OR52N1Q8NH53 320 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ZNF799Q96GE5 643 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 DCLRE1CQ96SD1 692 aaKnown RBP16.86■□□□□ 0.29
ATG3-208ENST00000495756 CDH20Q9HBT6 801 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 SLC24A3Q9HC58 644 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.86■□□□□ 0.29
ATG3-208ENST00000495756 CRYAAP02489 173 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 APOC1P02654 83 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 MT-ND5P03915 603 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 CALCRP30988 508 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 CX3CR1P49238 355 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 PSMA6P60900 246 aaKnown RBP16.86■□□□□ 0.29
ATG3-208ENST00000495756 BEX5Q5H9J7 111 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 NCMAPQ5T1S8 102 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 DRAM2Q6UX65 266 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ZNF283Q8N7M2 679 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 ZNF485Q8NCK3 441 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 SPRYD4Q8WW59 207 aaPredicted RBP16.86■□□□□ 0.29
ATG3-208ENST00000495756 PELI1Q96FA3 418 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 PLPPR2Q96GM1 343 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 DOK1Q99704 481 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 MND1Q9BWT6 205 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 GRIP1Q9Y3R0 1128 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 SNX5Q9Y5X3 404 aa16.86■□□□□ 0.29
ATG3-208ENST00000495756 DEFB108AA8MXU0 73 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 SIAH2O43255 324 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 RPP14O95059 124 aaKnown RBP16.85■□□□□ 0.29
ATG3-208ENST00000495756 SLC6A9P48067 706 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 NAA40Q86UY6 237 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 SPARTQ8N0X7 666 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 TSPAN14Q8NG11 270 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 GATAD2BQ8WXI9 593 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 C4orf45Q96LM5 186 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 KCNS3Q9BQ31 491 aa16.85■□□□□ 0.29
ATG3-208ENST00000495756 DOPEY2Q9Y3R5 2298 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 TMEM269A0A1B0GVZ9 245 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 ABCD4O14678 606 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 ICMTO60725 284 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 SRSF10O75494 262 aaKnown RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 WNT5AP41221 380 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 MAP2K4P45985 399 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 MMP16P51512 607 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 WNT4P56705 351 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 ZNF121P58317 390 aaPredicted RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 SPOCK1Q08629 439 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 TBCEQ15813 527 aaPredicted RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 ZNF829Q3KNS6 432 aaPredicted RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 ARL9Q6T311 187 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 RORBQ92753 470 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 RNF166Q96A37 237 aaPredicted RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 FAM206AQ9NX38 181 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 LSM2Q9Y333 95 aaKnown RBP16.84■□□□□ 0.29
ATG3-208ENST00000495756 R4GMQ9 66 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 DCHS2Q6V1P9 2916 aa16.84■□□□□ 0.29
ATG3-208ENST00000495756 PKDREJQ9NTG1 2253 aa16.83■□□□□ 0.29
ATG3-208ENST00000495756 PNPP00491 289 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 SLC2A1P11166 492 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 PCSK6P29122 969 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 PSMB10P40306 273 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 NR1H2P55055 460 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 EMX1Q04741 257 aaPredicted RBP16.83■□□□□ 0.28
ATG3-208ENST00000495756 MFGE8Q08431 387 aaPredicted RBP16.83■□□□□ 0.28
ATG3-208ENST00000495756 DAZAP2Q15038 168 aaPredicted RBP16.83■□□□□ 0.28
ATG3-208ENST00000495756 SP5Q6BEB4 398 aaPredicted RBP16.83■□□□□ 0.28
ATG3-208ENST00000495756 COLCA1Q6ZS62 124 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 PRSS45Q7RTY3 260 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 KLBQ86Z14 1044 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 ZNF101Q8IZC7 436 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 SVOPQ8N4V2 548 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 PSMG3-AS1Q96PY0 264 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 C1QTNF5Q9BXJ0 243 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 ACOT13Q9NPJ3 140 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 TBCCD1Q9NVR7 557 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 BABAM2Q9NXR7 383 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 EIF3KQ9UBQ5 218 aaKnown RBP16.83■□□□□ 0.28
ATG3-208ENST00000495756 KCNN3Q9UGI6 736 aa16.83■□□□□ 0.28
ATG3-208ENST00000495756 E9PI62 339 aa16.82■□□□□ 0.28
ATG3-208ENST00000495756 ATP6V1G2-DDX39BF2Z307 99 aa16.82■□□□□ 0.28
ATG3-208ENST00000495756 LCATP04180 440 aa16.82■□□□□ 0.28
ATG3-208ENST00000495756 ANXA2P07355 339 aaKnown RBP16.82■□□□□ 0.28
ATG3-208ENST00000495756 CD3EP07766 207 aa16.82■□□□□ 0.28
ATG3-208ENST00000495756 RGS6P49758 472 aa16.82■□□□□ 0.28
ATG3-208ENST00000495756 GBX2P52951 348 aaPredicted RBP16.82■□□□□ 0.28
ATG3-208ENST00000495756 MRPL28Q13084 256 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms