RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SPATC1	Q76KD6	591 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	CCDC54	Q8NEL0	328 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	FGFBP3	Q8TAT2	258 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	SMAP2	Q8WU79	429 aa	Predicted RBP	11.78	□□□□□ -0.52
APTX-231	ENST00000494973	GATAD2B	Q8WXI9	593 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	SGCD	Q92629	289 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	THRSP	Q92748	146 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	UFD1	Q92890	307 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	PELI1	Q96FA3	418 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	TTTY10	Q9BZA0	68 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	COMMD4	Q9H0A8	199 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	RGCC	Q9H4X1	137 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	OPA3	Q9H6K4	179 aa		11.78	□□□□□ -0.52
APTX-231	ENST00000494973	ESRP2	Q9H6T0	727 aa	Known RBP	11.78	□□□□□ -0.52
APTX-231	ENST00000494973	LSM2	Q9Y333	95 aa	Known RBP	11.78	□□□□□ -0.52
APTX-231	ENST00000494973	MYO18B	Q8IUG5	2567 aa		11.77	□□□□□ -0.52
APTX-231	ENST00000494973	C5orf49	A4QMS7	147 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF503-AS2	A6NEH8	195 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	TMEM212	A6NML5	194 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973		F5H5K5	113 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	GPRIN2	O60269	458 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	UBC	P0CG48	685 aa	Known RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	SMIM18	P0DKX4	95 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	JUNB	P17275	347 aa	Predicted RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	PCMT1	P22061	227 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	PSMA1	P25786	263 aa	Known RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	APEX1	P27695	318 aa	Known RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	PSMB9	P28065	219 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	PCSK6	P29122	969 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	TRAM1	Q15629	374 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	NEDD8	Q15843	81 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	TIGD6	Q17RP2	521 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	BCL2L15	Q5TBC7	163 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	KLB	Q86Z14	1044 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF485	Q8NCK3	441 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	OR5L1	Q8NGL2	311 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.77	□□□□□ -0.53
APTX-231	ENST00000494973	SMIM19	Q96E16	107 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	RADIL	Q96JH8	1075 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	POM121L2	Q96KW2	1035 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF75A	Q96N20	296 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	MGLL	Q99685	303 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	OR10A2	Q9H208	303 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	NOX3	Q9HBY0	568 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	TBCCD1	Q9NVR7	557 aa		11.77	□□□□□ -0.53
APTX-231	ENST00000494973	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973		A0A1W2PR80	420 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973		M0R1B8	84 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	PSMD9	O00233	223 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	XRCC2	O43543	280 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	RPP14	O95059	124 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ANXA2	P07355	339 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ACSM4	P0C7M7	580 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	CECR9	P0C854	216 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	HSMCR30	P0CW71	290 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF12	P17014	697 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	MAP2K4	P45985	399 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	RPL5	P46777	297 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF83	P51522	516 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	PRKX	P51817	358 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	RPS23	P62266	143 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	MALL	Q13021	153 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ALKBH1	Q13686	389 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	CDK5R1	Q15078	307 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	BEX5	Q5H9J7	111 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	SYT6	Q5T7P8	510 aa	Predicted RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	WFDC8	Q8IUA0	241 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF584	Q8IVC4	421 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	CPEB3	Q8NE35	698 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	FAM222B	Q8WU58	562 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	MUL1	Q969V5	352 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	PGAM5	Q96HS1	289 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	BCL2L14	Q9BZR8	327 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	ISG20L2	Q9H9L3	353 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	NUFIP1	Q9UHK0	495 aa	Known RBP	11.76	□□□□□ -0.53
APTX-231	ENST00000494973	DOPEY1	Q5JWR5	2465 aa		11.76	□□□□□ -0.53
APTX-231	ENST00000494973	SPTBN1	Q01082	2364 aa	Known RBP	11.75	□□□□□ -0.53
APTX-231	ENST00000494973	IGHV1-18	A0A0C4DH31	117 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	TRBV2	A0A0J9YWF9	115 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	PRR32	B1ATL7	298 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973		H3BSA7	217 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	CCRL2	O00421	344 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	LCK	P06239	509 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	ADRA2A	P08913	450 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	CCNO	P22674	350 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	RAD52	P43351	418 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	KIR2DL3	P43628	341 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF121	P58317	390 aa	Predicted RBP	11.75	□□□□□ -0.53
APTX-231	ENST00000494973	NAAA	Q02083	359 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	TPBG	Q13641	420 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	TIMM50	Q3ZCQ8	353 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	TMEM244	Q5VVB8	128 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	XAF1	Q6GPH4	301 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	CATSPERD	Q86XM0	798 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	MS4A15	Q8N5U1	240 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	OR2G2	Q8NGZ5	317 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
APTX-231	ENST00000494973	C4orf45	Q96LM5	186 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	WFIKKN1	Q96NZ8	548 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms