RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 IP6K3Q96PC2 410 aa2.26□□□□□ -2.05
NCL-210ENST00000494618 ZNF317Q96PQ6 595 aaPredicted RBP2.26□□□□□ -2.05
NCL-210ENST00000494618 MMACHCQ9Y4U1 282 aa2.26□□□□□ -2.05
NCL-210ENST00000494618 TRIP11Q15643 1979 aa2.26□□□□□ -2.05
NCL-210ENST00000494618 USP47Q96K76 1375 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 GOLGA8OA6NCC3 632 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 GOLGA8NF8WBI6 632 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 AP3B1O00203 1094 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 CHMP2AO43633 222 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 EIF4E2O60573 245 aaKnown RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 SERPINA5P05154 406 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 EIF4EP06730 217 aaKnown RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 UQCRFS1P1P0C7P4 283 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 ZNF24P17028 368 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 GGT1P19440 569 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 OTX1P32242 354 aaPredicted RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 NSG1P42857 185 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 ACLYP53396 1101 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 XKR7Q5GH72 579 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 METAP1DQ6UB28 335 aaPredicted RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 CENPQQ7L2Z9 268 aaPredicted RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 NIPA1Q7RTP0 329 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 SLC22A9Q8IVM8 553 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 OR5B3Q8NH48 314 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 SLC38A4Q969I6 547 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 OR5B12Q96R08 314 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 NUP58Q9BVL2 599 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 ANGPTL4Q9BY76 406 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 RHBDL2Q9NX52 303 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 UXTQ9UBK9 157 aaPredicted RBP2.25□□□□□ -2.05
NCL-210ENST00000494618 RABL2BQ9UNT1 228 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 AKNAQ7Z591 1439 aa2.25□□□□□ -2.05
NCL-210ENST00000494618 TRIM64CA6NLI5 447 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 H6PDO95479 791 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 PAHP00439 452 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 CST1P01037 141 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 IGHV3-11P01762 117 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 NAA10P41227 235 aaPredicted RBP2.24□□□□□ -2.05
NCL-210ENST00000494618 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
NCL-210ENST00000494618 CDH6P55285 790 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 TGM3Q08188 693 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 PGGHGQ32M88 737 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 TEX30Q5JUR7 227 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 GPR107Q5VW38 600 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 CERS6Q6ZMG9 384 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 NKAIN4Q8IVV8 208 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 ZNF664Q8N3J9 261 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 CHST4Q8NCG5 386 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 OR7G2Q8NG99 324 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 RAB3IL1Q8TBN0 382 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 TMEM230Q96A57 120 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 MCUR1Q96AQ8 359 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 CENPKQ9BS16 269 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 GGTLC1Q9BX51 225 aa2.24□□□□□ -2.05
NCL-210ENST00000494618 CTAGE15A4D2H0 777 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 LYRM9A8MSI8 78 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 MANBAO00462 879 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 FKBP6O75344 327 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 IGLV6-57P01721 117 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 CD37P11049 281 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 ZNF43P17038 809 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 LOXP28300 417 aaPredicted RBP2.23□□□□□ -2.05
NCL-210ENST00000494618 PRLHRP49683 370 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 STXBP1P61764 594 aaKnown RBP2.23□□□□□ -2.05
NCL-210ENST00000494618 C9orf135Q5VTT2 229 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 UBE2UQ5VVX9 321 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 CARD17Q5XLA6 110 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 ZYG11AQ6WRX3 759 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 CTAGE6Q86UF2 777 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 CSGALNACT2Q8N6G5 542 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 SLC35G3Q8N808 338 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 OR11H7Q8NGC8 314 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 OR10AD1Q8NGE0 317 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 RHOXF2Q9BQY4 288 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 SHANK2-AS3Q9BTD1 123 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 C1orf50Q9BV19 199 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 ZSCAN16Q9H4T2 348 aaPredicted RBP2.23□□□□□ -2.05
NCL-210ENST00000494618 NEK6Q9HC98 313 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 LGALS13Q9UHV8 139 aa2.23□□□□□ -2.05
NCL-210ENST00000494618 ZSWIM8A7E2V4 1837 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 THADAQ6YHU6 1953 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 IGHV3-49A0A0A0MS15 119 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 TRBV11-1A0A0K0K1C0 115 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 OR5H1A6NKK0 313 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 GABRR3A8MPY1 467 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 KRBOX1C9JBD0 128 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 AIM2O14862 343 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 RAB29O14966 203 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 U2AF2P26368 475 aaKnown RBP eCLIP2.22□□□□□ -2.051e-9■■■□□ 17.1
NCL-210ENST00000494618 TAGLN2P37802 199 aaKnown RBP2.22□□□□□ -2.05
NCL-210ENST00000494618 RBM34P42696 430 aaKnown RBP2.22□□□□□ -2.05
NCL-210ENST00000494618 RAB10P61026 200 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 RPL23P62829 140 aaKnown RBP2.22□□□□□ -2.05
NCL-210ENST00000494618 SPANXN2Q5MJ10 180 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 BBS5Q8N3I7 341 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 NPWQ8N729 165 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 PRELID2Q8N945 189 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 WDR34Q96EX3 536 aa2.22□□□□□ -2.05
NCL-210ENST00000494618 CHCHD7Q9BUK0 85 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms