RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DTX3Q8N9I9 347 aa12.38□□□□□ -0.43
PTPN7-216ENST00000492977 SLC25A38Q96DW6 304 aa12.38□□□□□ -0.43
PTPN7-216ENST00000492977 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
PTPN7-216ENST00000492977 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
PTPN7-216ENST00000492977 RBFOX1Q9NWB1 397 aaKnown RBP12.38□□□□□ -0.43
PTPN7-216ENST00000492977 TAS2R4Q9NYW5 299 aa12.38□□□□□ -0.43
PTPN7-216ENST00000492977 NCOA6Q14686 2063 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-216ENST00000492977 ACOT7O00154 380 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 LYRM1O43325 122 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 SYT7O43581 403 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 APOC1P02654 83 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 PRKXP51817 358 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF121P58317 390 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-216ENST00000492977 SRYQ05066 204 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 RAB11BQ15907 218 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-216ENST00000492977 FAM166AQ6J272 317 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-216ENST00000492977 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF283Q8N7M2 679 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 ABHD3Q8WU67 409 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 TRIM63Q969Q1 353 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
PTPN7-216ENST00000492977 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
PTPN7-216ENST00000492977 A0A1B0GTI1 187 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 A0A1B0GVI7 797 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 PROB1E7EW31 1015 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 EEF1E1O43324 174 aaKnown RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 DOK2O60496 412 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 CST2P09228 141 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 MNDAP41218 407 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 CX3CR1P49238 355 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 TNFSF10P50591 281 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 CCL11P51671 97 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 LRRC18Q8N456 261 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 CELF2-AS1Q8N7Q2 184 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 NKAIN3Q8N8D7 197 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 DUSP18Q8NEJ0 188 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 ENKURQ8TC29 256 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 FOXRED1Q96CU9 486 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF837Q96EG3 531 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 ZFP3Q96NJ6 502 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 RNF122Q9H9V4 155 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 TMEM38BQ9NVV0 291 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 PARPBPQ9NWS1 579 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
PTPN7-216ENST00000492977 MRPS7Q9Y2R9 242 aaKnown RBP12.36□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF891A8MT65 544 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 LANCL1O43813 399 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 ADRB1P08588 477 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 ITGA5P08648 1049 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 CCL1P22362 96 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 DDOSTP39656 456 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 CAPZA1P52907 286 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR8B12Q8NGG6 310 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR51E1Q8TCB6 317 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 SMIM4Q8WVI0 70 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 YIPF5Q969M3 257 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 FGGYQ96C11 551 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 KRTAP3-2Q9BYR7 98 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 LINC00470Q9BZP3 86 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 GPR35Q9HC97 309 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 NOSIPQ9Y314 301 aaKnown RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 LOC100289279A0A1B0GTE1 492 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF724A8MTY0 619 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OTX1P32242 354 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 KIR2DL3P43628 341 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
PTPN7-216ENST00000492977 GALK2Q01415 458 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 ECH1Q13011 328 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 CLN3Q13286 438 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 STK11Q15831 433 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 PRSS45Q7RTY3 260 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 FDCSPQ8NFU4 85 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR51D1Q8NGF3 324 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR6M1Q8NGM8 313 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms