RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 GJC3Q8NFK1 279 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 ZFP3Q96NJ6 502 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 TPK1Q9H3S4 243 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF835Q9Y2P0 537 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 GSTK1Q9Y2Q3 226 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 LRP12Q9Y561 859 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 TRBV2A0A0J9YWF9 115 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 TOXO94900 526 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 H2BFMP0C1H6 154 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 CD53P19397 219 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 SDC2P34741 201 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 RFX2P48378 723 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 FABP5Q01469 135 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 FOXF2Q12947 444 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 FAM131AQ6UXB0 335 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 C3P1Q6ZMU1 363 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 NRARPQ7Z6K4 114 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 DOLPP1Q86YN1 238 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 OR10S1Q8NGN2 331 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 AP3S1Q92572 193 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 SMIM19Q96E16 107 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 POU2F3Q9UKI9 436 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 LRRTM2O43300 516 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 TMIGD3P0DMS9 266 aaPredicted RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 MPGP29372 298 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 GDI2P50395 445 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 PCBD1P61457 104 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 SCN1BQ07699 218 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 SLC3A1Q07837 685 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 COQ7Q99807 217 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 TMED9Q9BVK6 235 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 KCNN2Q9H2S1 579 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
PDZRN3-210ENST00000492909 A0A1W2PQ09 198 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 TNFSF13O75888 250 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 CCNKO75909 580 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 HLA-DPB1P04440 258 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 NANOS3P60323 173 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 ASAH1Q13510 395 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 ALKBH1Q13686 389 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 TAF13Q15543 124 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 TRAM1Q15629 374 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 HIST2H3PS2Q5TEC6 136 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 FDX2Q6P4F2 183 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 HIST2H3AQ71DI3 136 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 SYT9Q86SS6 491 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 SKA3Q8IX90 412 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 RPS4Y2Q8TD47 263 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 GHSRQ92847 366 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 WACQ9BTA9 647 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 NIPAL2Q9H841 368 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 PNRC2Q9NPJ4 139 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
PDZRN3-210ENST00000492909 B8ZZF3 427 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 GPRIN2O60269 458 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 CD1AP06126 327 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ITGA5P08648 1049 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 DCTDP32321 178 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 PPP3R1P63098 170 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 RSBN1Q5VWQ0 802 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 Q6ZT83 130 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 NAXEQ8NCW5 288 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ATF6BQ99941 703 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 PDCD1LG2Q9BQ51 273 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 PLEK2Q9NYT0 353 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 FRRS1LQ9P0K9 344 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 TINAGQ9UJW2 476 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 FBXL3Q9UKT7 428 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 PROCRQ9UNN8 238 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC5A6Q9Y289 635 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 A0A096LPE4 126 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms