RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CDK13Q14004 1512 aaKnown RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 A0A075B6Q4 140 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 TRBV9A0A0B4J1U6 114 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 SERPINE3A8MV23 424 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 SMKR1H3BMG3 65 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 L7N2F9 121 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CHST1O43916 411 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CLDN11O75508 207 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 APCSP02743 223 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 SERPINE2P07093 398 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CT45A6P0DMU7 189 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CT45A5P0DMU8 189 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CT45A7P0DMV0 189 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 U2AF2P26368 475 aaKnown RBP eCLIP2.24□□□□□ -2.05
VTA1-204ENST00000491881 CDKN2DP55273 166 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 C21orf59P57076 290 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 RPS15P62841 145 aaKnown RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 IDI1Q13907 227 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 RCAN2Q14206 197 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 TRAM2Q15035 370 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CHRNA6Q15825 494 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 COX19Q49B96 90 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CT45A1Q5HYN5 189 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 METAP1DQ6UB28 335 aaPredicted RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 ARRDC1Q8N5I2 433 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 RNF182Q8N6D2 247 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 ZNF709Q8N972 641 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CHST4Q8NCG5 386 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 CT45A3Q8NHU0 189 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 LYPD6BQ8NI32 183 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 NUBPLQ8TB37 319 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 FLYWCH2Q96CP2 140 aaKnown RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 L3HYPDHQ96EM0 354 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 TMEM185BQ9H7F4 350 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 EDA2RQ9HAV5 297 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 TMEM165Q9HC07 324 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 MTCH1Q9NZJ7 389 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 VANGL2Q9ULK5 521 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 RFNGQ9Y644 331 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 GRIN2AQ12879 1464 aa2.24□□□□□ -2.05
VTA1-204ENST00000491881 TCOF1Q13428 1488 aaKnown RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 MAGI1Q96QZ7 1491 aaPredicted RBP2.24□□□□□ -2.05
VTA1-204ENST00000491881 DNAH12Q6ZR08 3092 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DCHS1Q96JQ0 3298 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 ASPMQ8IZT6 3477 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 UNC13BO14795 1591 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 ARAP3Q8WWN8 1544 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 GPATCH8Q9UKJ3 1502 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 PLA2R1Q13018 1463 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 IGLV1-36A0A0B4J1U3 117 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 TRAV40A0A0B4J280 105 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 A0A1B0GW55 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 H7C0C1 242 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 SCAMP2O15127 329 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 RAD51CO43502 376 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 EIF4E2O60573 245 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 HUS1O60921 280 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 CDH16O75309 829 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 GCM2O75603 506 aaPredicted RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 RBBP9O75884 186 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 YIF1AO95070 293 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 LINC00869P0C866 280 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 C1GALT1C1LP0DN25 315 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 SYKP43405 635 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 ATP5OP48047 213 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 MRPL19P49406 292 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 CRISP1P54107 249 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 BEX3Q00994 111 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 LIPEQ05469 1076 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 MERTKQ12866 999 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 IFT88Q13099 833 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 PIGHQ14442 188 aaPredicted RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 LY6EQ16553 131 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 PGGHGQ32M88 737 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 ALKBH6Q3KRA9 238 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 TCEAL5Q5H9L2 206 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 SAXO2Q658L1 398 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 EIF3MQ7L2H7 374 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 BHLHA15Q7RTS1 189 aaPredicted RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 CBR4Q8N4T8 237 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 OR8U1Q8NH10 309 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 TCEAL3Q969E4 200 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DCPSQ96C86 337 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 GSDMAQ96QA5 445 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 TGS1Q96RS0 853 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 HSD17B10Q99714 261 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 RETNQ9HD89 108 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 RAB20Q9NX57 234 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 LYARQ9NX58 379 aaKnown RBP2.23□□□□□ -2.05
VTA1-204ENST00000491881 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 SLC17A4Q9Y2C5 497 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 CAMSAP1Q5T5Y3 1602 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 ADAMTS13Q76LX8 1427 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 DIP2AQ14689 1571 aa2.23□□□□□ -2.05
VTA1-204ENST00000491881 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms