RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 BRD7Q9NPI1 651 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF224Q9NZL3 707 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 JKAMPQ9P055 326 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 NPTNQ9Y639 398 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 FKBP7Q9Y680 259 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 MPDZO75970 2070 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 A0A1W2PNV4 684 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 CIB4A0PJX0 185 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 SNAPC5O75971 98 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 MRPL3P09001 348 aaKnown RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 EPXP11678 715 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PRF1P14222 555 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF3P17036 446 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PTNP21246 168 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PYCR1P32322 319 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 KIR2DL2P43627 348 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 CARD18P57730 90 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 FXYD6P3P58550 94 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PUDPQ08623 228 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 POU4F2Q12837 409 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 GUSBP1Q15486 140 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZSWIM7Q19AV6 140 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-219ENST00000491747 SMIM4Q8WVI0 70 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM234Q8WY98 164 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PTP4A1Q93096 173 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 CMTM3Q96MX0 182 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 PRSS27Q9BQR3 290 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ADGRL4Q9HBW9 690 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 SPATA2Q9UM82 520 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF175Q9Y473 711 aa8.32□□□□□ -1.08
BRCA1-219ENST00000491747 DCHS2Q6V1P9 2916 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 IGHV3-15A0A0B4J1V0 119 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM72A0PK05 275 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 SCO1O75880 301 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 MPC2O95563 127 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 IL18BPO95998 194 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 MT-ND4P03905 459 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF250P15622 560 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ATF1P18846 271 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ENPP1P22413 925 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 TACR3P29371 465 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 OPRM1P35372 400 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 APOBEC1P41238 236 aaKnown RBP8.31□□□□□ -1.08
BRCA1-219ENST00000491747 OR12D2P58182 307 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 AP3S2P59780 193 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 KLF9Q13886 244 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-219ENST00000491747 C3orf33Q6P1S2 294 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 GRINAQ7Z429 371 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 FTMTQ8N4E7 242 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF671Q8TAW3 534 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 STARD4Q96DR4 205 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ARL5BQ96KC2 179 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 RBP7Q96R05 134 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 OR11A1Q9GZK7 315 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 BAIAP2Q9UQB8 552 aa8.31□□□□□ -1.08
BRCA1-219ENST00000491747 TMED7-TICAM2A0A0A6YYA0 188 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 A0A1W2PPL8 197 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 A0A1W2PRG6 482 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ECDO95905 644 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 CGAP01215 116 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 MAKP20794 623 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 GDNFP39905 211 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ACTA2P62736 377 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ACTG2P63267 376 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 SIRPAP78324 504 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF85Q03923 595 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 UBE2NLQ5JXB2 153 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 METTL11BQ5VVY1 283 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM65Q6PI78 240 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 MEX3BQ6ZN04 569 aaKnown RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 TMPRSS11FQ6ZWK6 438 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF440Q8IYI8 595 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 PFN4Q8NHR9 129 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 BPIFA2Q96DR5 249 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 SMIM19Q96E16 107 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 OR5B2Q96R09 309 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 SFXN3Q9BWM7 321 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ZCCHC4Q9H5U6 513 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 METTL17Q9H7H0 456 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 C20orf141Q9NUB4 165 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 CHRNA9Q9UGM1 479 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 TMED7Q9Y3B3 224 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 MED31Q9Y3C7 131 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 FBN2P35556 2912 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 NAP1L6A6NFF2 107 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ANKRD61A6NGH8 418 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 EEF1E1-BLOC1S5C9J1V9 151 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 BET1O15155 118 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 FUT1P19526 365 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 HTR2AP28223 471 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 NOS3P29474 1203 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ASCL1P50553 236 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 BLVRAP53004 296 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms