RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZNF416Q9BWM5 594 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 YTHDF1Q9BYJ9 559 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 ANKRD60Q9BZ19 345 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 NMNAT2Q9BZQ4 307 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 SHARPINQ9H0F6 387 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 CDH20Q9HBT6 801 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 CLN6Q9NWW5 311 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 PLEK2Q9NYT0 353 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 NDRG4Q9ULP0 352 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 LRCH1Q9Y2L9 728 aa9.47□□□□□ -0.89
TMEM39A-211ENST00000491685 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 HAX1O00165 279 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SGCEO43556 437 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 PRKYO43930 277 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 MPZL1O95297 269 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SNAP29O95721 258 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 APOC1P02654 83 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 LYNX1P0DP58 116 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 COX5BP10606 129 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF32P17041 273 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 CCNOP22674 350 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 THBS2P35442 1172 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 CAPGP40121 348 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SLC15A1P46059 708 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 ENTPD1P49961 510 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SELENOVP59797 346 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 PSG4Q00888 419 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 POU4F2Q12837 409 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 ECH1Q13011 328 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 PABPC1L2AQ5JQF8 200 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 FAM120AOSQ5T036 256 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 FAM166AQ6J272 317 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SLC26A10Q8NG04 563 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 OR51L1Q8NGJ5 315 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 FAM81AQ8TBF8 368 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 IL4I1Q96RQ9 567 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 INTS14Q96SY0 518 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 MNTQ99583 582 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 PITX2Q99697 317 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 ADI1Q9BV57 179 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 OR2H1Q9GZK4 316 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 TPK1Q9H3S4 243 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 SP140LQ9H930 580 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 HINT3Q9NQE9 182 aaKnown RBP9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 WARS2Q9UGM6 360 aaKnown RBP9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 PCDHGB1Q9Y5G3 927 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 TMEM14AQ9Y6G1 99 aa9.46□□□□□ -0.9
TMEM39A-211ENST00000491685 DCTN6O00399 190 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 GYPBP06028 91 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 SPARCP09486 303 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 DAOP14920 347 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF14P17017 642 aaPredicted RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 TUBG1P23258 451 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 STOMP27105 288 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 EVX1P49640 407 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 CXCR4P61073 352 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ADARB1P78563 741 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 EFNB1P98172 346 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 MED21Q13503 144 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 APOFQ13790 326 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ENDOGQ14249 297 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 OCLNQ16625 522 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 MOGQ16653 247 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ELFN2Q5R3F8 820 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 RHOUQ7L0Q8 258 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 SLC30A7Q8NEW0 376 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 OR6N2Q8NGY6 317 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 CYGBQ8WWM9 190 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 COG8Q96MW5 612 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 DCLRE1CQ96SD1 692 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 MRPL37Q9BZE1 423 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 MED20Q9H944 212 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ELOVL3Q9HB03 270 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 EMC7Q9NPA0 242 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 MYEF2Q9P2K5 600 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 GPR160Q9UJ42 338 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 FZR1Q9UM11 496 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 CMAHPQ9Y471 501 aa9.45□□□□□ -0.9
TMEM39A-211ENST00000491685 OR6C6A6NF89 314 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 TVP23AA6NH52 213 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 DLGAP1O14490 977 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 PHYHO14832 338 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 WIPF1O43516 503 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 LILRA1O75019 489 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 TFP02787 698 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 ADRA2AP08913 450 aa9.44□□□□□ -0.9
TMEM39A-211ENST00000491685 MMP7P09237 267 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms