RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 Q8TCH9 128 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 ERGIC1Q969X5 290 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 ZNF570Q96NI8 536 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 TECTBQ96PL2 329 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 TRIM15Q9C019 465 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 TCF7L1Q9HCS4 588 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 ACOXLQ9NUZ1 547 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 TMEM100Q9NV29 134 aa17.15■□□□□ 0.34
CLIP2-208ENST00000491075 CENPVL3A0A0U1RRI6 287 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 TOX4O94842 621 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 TSPAN15O95858 294 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 MMP9P14780 707 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 FPR3P25089 353 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 LRRC23Q53EV4 343 aaPredicted RBP17.14■□□□□ 0.33
CLIP2-208ENST00000491075 C1QL4Q86Z23 238 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 GLB1L2Q8IW92 636 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 OFCC1Q8IZS5 231 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 TPD52L3Q96J77 140 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 Q96M85 177 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 NDEL1Q9GZM8 345 aa17.14■□□□□ 0.33
CLIP2-208ENST00000491075 RER1O15258 196 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 TRAM2Q15035 370 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 KCNJ8Q15842 424 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 FAM122BQ7Z309 247 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 WDFY2Q96P53 400 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 TBX15Q96SF7 602 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 COQ7Q99807 217 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 HCAR1Q9BXC0 346 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 HDHD2Q9H0R4 259 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 MMADHCQ9H3L0 296 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-208ENST00000491075 POLR1DQ9Y2S0 133 aa17.13■□□□□ 0.33
CLIP2-208ENST00000491075 IGHV1-69DA0A0B4J2H0 117 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 SLC16A7O60669 478 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 KHDRBS3O75525 346 aaKnown RBP17.12■□□□□ 0.33
CLIP2-208ENST00000491075 IGHV1-69P01742 117 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 HLA-DPB1P04440 258 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 KRR1Q13601 381 aaKnown RBP17.12■□□□□ 0.33
CLIP2-208ENST00000491075 METTL11BQ5VVY1 283 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 OTPQ5XKR4 325 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 LDLRAD3Q86YD5 345 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
CLIP2-208ENST00000491075 PNLDC1Q8NA58 520 aaKnown RBP17.12■□□□□ 0.33
CLIP2-208ENST00000491075 FNDC11Q9BVV2 318 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 SYT4Q9H2B2 425 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 RERGLQ9H628 205 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 ERVK-18Q9QC07 812 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 TMCC3Q9ULS5 477 aa17.12■□□□□ 0.33
CLIP2-208ENST00000491075 COA3Q9Y2R0 106 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-208ENST00000491075 FXYD1O00168 92 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 FAM20BO75063 409 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 IGHV4-59P01825 116 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 FUT4P22083 530 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 KDELR2P33947 212 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 CD200P41217 278 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 SELENOWP63302 87 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 MAB21L1Q13394 359 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 KCNMB1Q16558 191 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 C2orf68Q2NKX9 166 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 ZBED5Q49AG3 693 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 CLEC12AQ5QGZ9 265 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 GDPGP1Q6ZNW5 385 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 C19orf18Q8NEA5 215 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 GJC3Q8NFK1 279 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 DYDC1Q8WWB3 177 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 ACOT11Q8WXI4 607 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-208ENST00000491075 WDR76Q9H967 626 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 NMNAT1Q9HAN9 279 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-208ENST00000491075 RHCGQ9UBD6 479 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 CTSZQ9UBR2 303 aa17.11■□□□□ 0.33
CLIP2-208ENST00000491075 CDC42EP2O14613 210 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 ZNF26P17031 533 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-208ENST00000491075 SDHAP31040 664 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 GPR4P46093 362 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 IER3P46695 156 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 RAD23AP54725 363 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 FBLN7Q53RD9 439 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 PGM2L1Q6PCE3 622 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 ZNF730Q6ZMV8 503 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 TMPRSS11FQ6ZWK6 438 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 ZSCAN4Q8NAM6 433 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-208ENST00000491075 LRTOMTQ8WZ04 291 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 LZICQ8WZA0 190 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
CLIP2-208ENST00000491075 VSX1Q9NZR4 365 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-208ENST00000491075 TET2Q6N021 2002 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-208ENST00000491075 ELOVL7A1L3X0 281 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 FAM220BPB1ANY3 271 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 NPPAP01160 153 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 IFNW1P05000 195 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 YAP1P46937 504 aaKnown RBP17.09■□□□□ 0.33
CLIP2-208ENST00000491075 HIST1H3AP68431 136 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 HIST2H3PS2Q5TEC6 136 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 GPR139Q6DWJ6 353 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 COLCA1Q6ZS62 124 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 MBOAT2Q6ZWT7 520 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 HIST2H3AQ71DI3 136 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 ADCK1Q86TW2 530 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 SCCPDHQ8NBX0 429 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 FAM110DQ8TAY7 271 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms