RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 LAP3P28838 519 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 NANOS3P60323 173 aaKnown RBP13.73□□□□□ -0.21
PCCB-218ENST00000490504 ROM1Q03395 351 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 ALKBH1Q13686 389 aaKnown RBP13.73□□□□□ -0.21
PCCB-218ENST00000490504 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 OR52N5Q8NH56 324 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 ROBO4Q8WZ75 1007 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 MCHR2Q969V1 340 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 WFIKKN1Q96NZ8 548 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 OR2M2Q96R28 347 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 ABHD6Q9BV23 337 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 PALMDQ9NP74 551 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 PAQR5Q9NXK6 330 aaPredicted RBP13.73□□□□□ -0.21
PCCB-218ENST00000490504 NDRG3Q9UGV2 375 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 PLEKHA6Q9Y2H5 1048 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 ZNF281Q9Y2X9 895 aa13.73□□□□□ -0.21
PCCB-218ENST00000490504 HRNRQ86YZ3 2850 aaPredicted RBP13.73□□□□□ -0.21
PCCB-218ENST00000490504 A0A1W2PPL8 197 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 TMCC2O75069 709 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 MYL9P24844 172 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 CCKARP32238 428 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 CSNK1A1P48729 337 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 LRRN1Q6UXK5 716 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 OR13C5Q8NGS8 318 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 C11orf40Q8WZ69 217 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 AP3S1Q92572 193 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 GMPPAQ96IJ6 420 aaPredicted RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 PDCD1LG2Q9BQ51 273 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 MROQ9BYG7 248 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 ELOVL3Q9HB03 270 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 A0A1W2PPR1 153 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 SHISA3A0PJX4 238 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 J3QRK9 145 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 SS18L1O75177 396 aaPredicted RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 GATBO75879 557 aaKnown RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 QDPRP09417 244 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 RIDAP52758 137 aaKnown RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 RPS11P62280 158 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCCB-218ENST00000490504 YIF1BQ5BJH7 314 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 ZMAT1Q5H9K5 638 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 FDX2Q6P4F2 183 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 KRT77Q7Z794 578 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 OR2G2Q8NGZ5 317 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 RNF128Q8TEB7 428 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 HSD17B8Q92506 261 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 PHYHIPQ92561 330 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 NINJ1Q92982 152 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 MAP6Q96JE9 813 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 ZNF385AQ96PM9 386 aaKnown RBP13.72□□□□□ -0.21
PCCB-218ENST00000490504 PLEKHF2Q9H8W4 249 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 GLTPQ9NZD2 209 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 EMC9Q9Y3B6 208 aa13.72□□□□□ -0.21
PCCB-218ENST00000490504 C16orf97H3BN30 126 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 ZFPL1O95159 310 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 ZNF133P52736 654 aaPredicted RBP13.71□□□□□ -0.22
PCCB-218ENST00000490504 RASGEF1BQ0VAM2 473 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 ZNF544Q6NX49 715 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 C22orf34Q6ZV56 151 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 TPRA1Q86W33 373 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 OR6K3Q8NGY3 331 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 OR6N1Q8NGY5 312 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 OR5AK2Q8NH90 309 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 ST7LQ8TDW4 575 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 PPIL3Q9H2H8 161 aaKnown RBP13.71□□□□□ -0.22
PCCB-218ENST00000490504 FRRS1LQ9P0K9 344 aa13.71□□□□□ -0.22
PCCB-218ENST00000490504 SMIM30A4D0T7 59 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 TMEM212A6NML5 194 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ZNF716A6NP11 495 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 SIAH2O43255 324 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ZNF254O75437 659 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ARL6IP5O75915 188 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ZNF432O94892 652 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 GOSR1O95249 250 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 UCHL1P09936 223 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 CFL1P23528 166 aaKnown RBP13.7□□□□□ -0.22
PCCB-218ENST00000490504 DNASE1P24855 282 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ETV6P41212 452 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 CAV3P56539 151 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 KCNMB1Q16558 191 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 C10orf128Q5T292 105 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 LINC00346Q8IVM7 164 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 ABHD3Q8WU67 409 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 C4orf45Q96LM5 186 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 COMMD4Q9H0A8 199 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 SEC61A2Q9H9S3 476 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
PCCB-218ENST00000490504 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms