RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 OR2Z1Q8NG97 314 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 OR51L1Q8NGJ5 315 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 OR51F2Q8NH61 342 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 GIPC3Q8TF64 312 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 CANT1Q8WVQ1 401 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 RAB1CQ92928 201 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 RAB39BQ96DA2 213 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 NIPSNAP1Q9BPW8 284 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 ZNF665Q9H7R5 613 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 PNRC2Q9NPJ4 139 aaKnown RBP16.74■□□□□ 0.27
SMC4-222ENST00000490207 DYSFO75923 2080 aa16.74■□□□□ 0.27
SMC4-222ENST00000490207 ARRDC5A6NEK1 342 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 TVP23AA6NH52 213 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 F5H5K5 113 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 GNGT2O14610 69 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 IFNGP01579 166 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 MSMBP08118 114 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 ACSM4P0C7M7 580 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 HOXB6P17509 224 aaKnown RBP16.73■□□□□ 0.27
SMC4-222ENST00000490207 FLOT2Q14254 428 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 ZNF362Q5T0B9 420 aaPredicted RBP16.73■□□□□ 0.27
SMC4-222ENST00000490207 LYPD4Q6UWN0 246 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 SPATA24Q86W54 205 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 TEX47Q8TBZ9 253 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 ZNRF4Q8WWF5 429 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 TMEM186Q96B77 213 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 SLC7A6OSQ96CW6 309 aaPredicted RBP16.73■□□□□ 0.27
SMC4-222ENST00000490207 MAP6Q96JE9 813 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 RBM4Q9BWF3 364 aaKnown RBP16.73■□□□□ 0.27
SMC4-222ENST00000490207 COMMD3-BMI1R4GMX3 469 aa16.73■□□□□ 0.27
SMC4-222ENST00000490207 FBN1P35555 2871 aaKnown RBP16.72■□□□□ 0.27
SMC4-222ENST00000490207 ISPDA4D126 451 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 IGHV2-5P01817 119 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 ZNF3P17036 446 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 TNFRSF1AP19438 455 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 RPS27P42677 84 aaKnown RBP16.72■□□□□ 0.27
SMC4-222ENST00000490207 RSPO1Q2MKA7 263 aaPredicted RBP16.72■□□□□ 0.27
SMC4-222ENST00000490207 OR2T2Q6IF00 324 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 CD300LDQ6UXZ3 194 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 COLCA1Q6ZS62 124 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 ITLN1Q8WWA0 313 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 FEVQ99581 238 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 GAL3ST1Q99999 423 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 C1QTNF5Q9BXJ0 243 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 HIF1ANQ9NWT6 349 aa16.72■□□□□ 0.27
SMC4-222ENST00000490207 RIIAD1A6NNX1 92 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 H3BN98 237 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 SURF4O15260 269 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 DEAF1O75398 565 aaPredicted RBP16.71■□□□□ 0.27
SMC4-222ENST00000490207 DNAJC8O75937 253 aaPredicted RBP16.71■□□□□ 0.27
SMC4-222ENST00000490207 GYPBP06028 91 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 PSKH1P11801 424 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 SPI1P17947 270 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 SLC25A1P53007 311 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 HNRNPA0Q13151 305 aaKnown RBP16.71■□□□□ 0.27
SMC4-222ENST00000490207 TMEM179BQ7Z7N9 219 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 PEG10Q86TG7 708 aaKnown RBP16.71■□□□□ 0.27
SMC4-222ENST00000490207 OR10S1Q8NGN2 331 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 SPTSSAQ969W0 71 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 NMNAT2Q9BZQ4 307 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 WDR76Q9H967 626 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 TMEM106BQ9NUM4 274 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 PDP1Q9P0J1 537 aaPredicted RBP16.71■□□□□ 0.27
SMC4-222ENST00000490207 IL19Q9UHD0 177 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 ATRQ13535 2644 aa16.71■□□□□ 0.27
SMC4-222ENST00000490207 M0R135 149 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 PHF1O43189 567 aaPredicted RBP16.7■□□□□ 0.26
SMC4-222ENST00000490207 E2F6O75461 281 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 LCATP04180 440 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 SPARCP09486 303 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 CLUP10909 449 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 FMO3P31513 532 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 GRK5P34947 590 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 SRP14P37108 136 aaKnown RBP16.7■□□□□ 0.26
SMC4-222ENST00000490207 ENTPD1P49961 510 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 TPTEP56180 551 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 ZNF771Q7L3S4 317 aaPredicted RBP16.7■□□□□ 0.26
SMC4-222ENST00000490207 IQCF1Q8N6M8 205 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 ZNF283Q8N7M2 679 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 OR8G5Q8NG78 346 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 OR10AD1Q8NGE0 317 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 OR6K6Q8NGW6 343 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 ZNF799Q96GE5 643 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 ZNF582Q96NG8 517 aaPredicted RBP16.7■□□□□ 0.26
SMC4-222ENST00000490207 OR2V2Q96R30 315 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 HCAR1Q9BXC0 346 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 CMC2Q9NRP2 79 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 DDX28Q9NUL7 540 aaKnown RBP16.7■□□□□ 0.26
SMC4-222ENST00000490207 DCAF16Q9NXF7 216 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 POMPQ9Y244 141 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 NPTNQ9Y639 398 aa16.7■□□□□ 0.26
SMC4-222ENST00000490207 MXRA5Q9NR99 2828 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 TRAV20A0A0B4J274 112 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 TCRBV3S1A0A5B6 114 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 RNF212BA8MTL3 300 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 IQCF6A8MYZ5 107 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 FKBP6O75344 327 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 ANPEPP15144 967 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 SELEP16581 610 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms