RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 POLR1DQ9Y2S0 133 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 A0A1B0GWJ7 208 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 SOCS2O14508 198 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 NDUFB2O95178 105 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 KNG1P01042 644 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 PRSS12P56730 875 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 FGF12P61328 243 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 KCNMB1Q16558 191 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 WDR25Q64LD2 544 aaPredicted RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 GPR139Q6DWJ6 353 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF841Q6ZN19 808 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 HIST2H3AQ71DI3 136 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 CBLL1Q75N03 491 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 ADCK1Q86TW2 530 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 C1orf87Q8N0U7 546 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 KIR3DL3Q8N743 410 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 GJC3Q8NFK1 279 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 HSH2DQ96JZ2 352 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 TSSK2Q96PF2 358 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 GPX7Q96SL4 187 aaPredicted RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 COQ7Q99807 217 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 MARCH7Q9H992 704 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 TMEM100Q9NV29 134 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 SIGLEC7Q9Y286 467 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 TMEM5Q9Y2B1 443 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 LHFPL6Q9Y693 200 aa13.22□□□□□ -0.29
PLOD3-216ENST00000489927 PRKDCP78527 4128 aaKnown RBP13.22□□□□□ -0.29
PLOD3-216ENST00000489927 C22orf46C9J442 243 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 DCTN6O00399 190 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 CXCR6O00574 342 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 PHYHO14832 338 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 FPR3P25089 353 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 CDKN2AP42771 156 aaKnown RBP13.21□□□□□ -0.29
PLOD3-216ENST00000489927 GATA4P43694 442 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 CENPAP49450 140 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 RAG2P55895 527 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 FXYD6P3P58550 94 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 RELBQ01201 579 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 LIPEQ05469 1076 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 MAB21L1Q13394 359 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 RSPO1Q2MKA7 263 aaPredicted RBP13.21□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF362Q5T0B9 420 aaPredicted RBP13.21□□□□□ -0.29
PLOD3-216ENST00000489927 GPR157Q5UAW9 335 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 FIP1L1Q6UN15 594 aaKnown RBP13.21□□□□□ -0.29
PLOD3-216ENST00000489927 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 DCDC5Q6ZRR9 648 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 FKBP9P1Q75LS8 142 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 SLC15A3Q8IY34 581 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 C19orf18Q8NEA5 215 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 RCN3Q96D15 328 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 BEX1Q9HBH7 125 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 IER3IP1Q9Y5U9 82 aa13.21□□□□□ -0.29
PLOD3-216ENST00000489927 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 SERPINA1P01009 418 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 TROVE2P10155 538 aaKnown RBP eCLIP13.2□□□□□ -0.3
PLOD3-216ENST00000489927 IRF2P14316 349 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 PSMB10P40306 273 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 BPIFB3P59826 476 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-216ENST00000489927 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-216ENST00000489927 OCLNQ16625 522 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 RUSC1-AS1Q66K80 236 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 Q6YL49 198 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 OR4F5Q8NH21 305 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 Q8TCH9 128 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 RSRC1Q96IZ7 334 aaKnown RBP13.2□□□□□ -0.3
PLOD3-216ENST00000489927 PCGF1Q9BSM1 259 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 HCAR1Q9BXC0 346 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 CHIAQ9BZP6 476 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 NOX4Q9NPH5 578 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 RPS6KA6Q9UK32 745 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 AP3M1Q9Y2T2 418 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 ENPP4Q9Y6X5 453 aa13.2□□□□□ -0.3
PLOD3-216ENST00000489927 IGLV1-36A0A0B4J1U3 117 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 GSTA4O15217 222 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 ENSAO43768 121 aaKnown RBP13.19□□□□□ -0.3
PLOD3-216ENST00000489927 FAM20BO75063 409 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 TXNDC12O95881 172 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 CRYBA1P05813 215 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 SFTPBP07988 381 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 OMPP47874 163 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
PLOD3-216ENST00000489927 COX10Q12887 443 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 MPPED2Q15777 294 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 CLEC12AQ5QGZ9 265 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms