RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PIGFQ07326 219 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TMED1Q13445 227 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ENDOGQ14249 297 aaKnown RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 RAB35Q15286 201 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 DNM1P46Q6ZS02 220 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 Q71RC1 249 aaPredicted RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TUBA1AQ71U36 451 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SHFQ7M4L6 423 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 GLB1L2Q8IW92 636 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 RFLNBQ8N5W9 214 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 OR4F15Q8NGB8 312 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 OR52I1Q8NGK6 324 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 C11orf40Q8WZ69 217 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 C12orf43Q96C57 262 aaKnown RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 RNFT2Q96EX2 444 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 FGF20Q9NP95 211 aaPredicted RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 POLE4Q9NR33 117 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TMEM38BQ9NVV0 291 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF224Q9NZL3 707 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 KLHDC2Q9Y2U9 406 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF503-AS2A6NEH8 195 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 SSX4O60224 188 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 NDUFS7O75251 213 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 MT-ND2P03891 347 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 MRPL3P09001 348 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 NR2C1P13056 603 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 PSMB9P28065 219 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 NAA10P41227 235 aaPredicted RBP9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 RPS27P42677 84 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 CAPZA2P47755 286 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 HCCSP53701 268 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 GLO1Q04760 184 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 ST3GAL4Q11206 333 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 IRF3Q14653 427 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 DNM1P34Q6PK57 102 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 SSX6Q7RTT6 188 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF367Q7RTV3 350 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 IL17RDQ8NFM7 739 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 OR6K6Q8NGW6 343 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 NANOS1Q8WY41 292 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 AMELYQ99218 206 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 FOXB1Q99853 325 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 JAM3Q9BX67 310 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 REG4Q9BYZ8 158 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 RERGLQ9H628 205 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 EMC7Q9NPA0 242 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 CA10Q9NS85 328 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 ENPP5Q9UJA9 477 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 FBXO9Q9UK97 447 aaPredicted RBP9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 COPS3Q9UNS2 423 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 LHFPL6Q9Y693 200 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 PLCE1Q9P212 2302 aa9.13□□□□□ -0.95
SCAMP4-208ENST00000489554 A0A1W2PPL8 197 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 VSTM5A8MXK1 200 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 FADS2O95864 444 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 B4GALT1P15291 398 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 C21orf33P30042 268 aaPredicted RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 SERPINF1P36955 418 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 CENPAP49450 140 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 IDH3GP51553 393 aaPredicted RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 RPS7P62081 194 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 SNRPD2P62316 118 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 HIST1H3AP68431 136 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 RAB40BQ12829 278 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 SWI5Q1ZZU3 235 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 GSG1Q2KHT4 349 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 TEX30Q5JUR7 227 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 HIST2H3PS2Q5TEC6 136 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 LCN1P1Q5VSP4 162 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 FAM27BQ5VT28 67 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 CLEC2AQ6UVW9 174 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF813Q6ZN06 617 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 GDPGP1Q6ZNW5 385 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 HIST2H3AQ71DI3 136 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC16A9Q7RTY1 509 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 MDP1Q86V88 176 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF485Q8NCK3 441 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 NUP37Q8NFH4 326 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 OR51G2Q8NGK0 314 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 OR10S1Q8NGN2 331 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 FBXO17Q96EF6 278 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 CNN2Q99439 309 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 FUNDC2Q9BWH2 189 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF416Q9BWM5 594 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 MND1Q9BWT6 205 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF442Q9H7R0 627 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 NOX3Q9HBY0 568 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 B3GNT2Q9NY97 397 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 CYB5R1Q9UHQ9 305 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 FBXL3Q9UKT7 428 aa9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 DIMT1Q9UNQ2 313 aaKnown RBP9.12□□□□□ -0.95
SCAMP4-208ENST00000489554 B9A039 149 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 H3BMQ9 156 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms