RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 LINC00471Q8N535 108 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 TEX29Q8N6K0 151 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 ATG16L2Q8NAA4 619 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 CYB561A3Q8NBI2 242 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 OR8G5Q8NG78 346 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 OR2AJ1Q8NGZ0 328 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 ST7LQ8TDW4 575 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 SIGLEC11Q96RL6 698 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 CDADC1Q9BWV3 514 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 MUC13Q9H3R2 512 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 WDR76Q9H967 626 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 MRPL22Q9NWU5 206 aaKnown RBP19.4■□□□□ 0.7
COL9A3-213ENST00000489045 CYB5R1Q9UHQ9 305 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 J3QLI3 93 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 CCNB2O95067 398 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 GASTP01350 101 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 ACSM4P0C7M7 580 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 PYCR1P32322 319 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF770Q6IQ21 691 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-213ENST00000489045 LCN8Q6JVE9 175 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 COLCA1Q6ZS62 124 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 BHLHE23Q8NDY6 225 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 OR8D4Q8NGM9 314 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF582Q96NG8 517 aaPredicted RBP19.39■□□□□ 0.69
COL9A3-213ENST00000489045 ATF6BQ99941 703 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 C1QTNF5Q9BXJ0 243 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 MAGIXQ9H6Y5 334 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 PNRC2Q9NPJ4 139 aaKnown RBP19.39■□□□□ 0.69
COL9A3-213ENST00000489045 VNN3Q9NY84 501 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 IL20Q9NYY1 176 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 PCDHB10Q9UN67 800 aa19.39■□□□□ 0.69
COL9A3-213ENST00000489045 F5H5K5 113 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 H0YL77 283 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 VENTXO95231 258 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 MMP16P51512 607 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 BTG1P62324 171 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 TRAP1Q12931 704 aaKnown RBP19.38■□□□□ 0.69
COL9A3-213ENST00000489045 ECH1Q13011 328 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 ZMYND11Q15326 602 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 SLC27A4Q6P1M0 643 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 RASSF6Q6ZTQ3 369 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 C1QL2Q7Z5L3 287 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 DHFR2Q86XF0 187 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 SPICQ8N5J4 248 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 AQP11Q8NBQ7 271 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 PROKR2Q8NFJ6 384 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 OR13G1Q8NGZ3 307 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 MEGF10Q96KG7 1140 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 DDOQ99489 341 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 GCM1Q9NP62 436 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 TBC1D23Q9NUY8 699 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 KCNG2Q9UJ96 466 aa19.38■□□□□ 0.69
COL9A3-213ENST00000489045 A0A0A6YYJ9 748 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 IQCF6A8MYZ5 107 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 RGS9O75916 674 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF823P16415 610 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 ADRA2CP18825 462 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 EPHA1P21709 976 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 GATA3P23771 443 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 ZFP36P26651 326 aaKnown RBP19.37■□□□□ 0.69
COL9A3-213ENST00000489045 PRSS12P56730 875 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 MS4A2Q01362 244 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 TRIM25Q14258 630 aaKnown RBP19.37■□□□□ 0.69
COL9A3-213ENST00000489045 TMEM155Q4W5P6 130 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 SEMA6DQ8NFY4 1073 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 MAP6Q96JE9 813 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 SLC30A2Q9BRI3 323 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 HCAR1Q9BXC0 346 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 ANK2Q01484 3957 aa19.37■□□□□ 0.69
COL9A3-213ENST00000489045 TVP23AA6NH52 213 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 MLNRO43193 412 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 FOXH1O75593 365 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 FAM107AO95990 144 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 LCATP04180 440 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 CALB2P22676 271 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 RPS27P42677 84 aaKnown RBP19.36■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF362Q5T0B9 420 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-213ENST00000489045 OR2T5Q6IEZ7 315 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 LYPD4Q6UWN0 246 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 NAA40Q86UY6 237 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 LRRC28Q86X40 367 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-213ENST00000489045 KLHL36Q8N4N3 616 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 SLC37A3Q8NCC5 494 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 CCDC197Q8NCU1 140 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 OR9Q1Q8NGQ5 310 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 OR2T4Q8NH00 348 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 OR2T29Q8NH02 315 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF420Q8TAQ5 688 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-213ENST00000489045 ZNRF4Q8WWF5 429 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 PATZ1Q9HBE1 687 aaKnown RBP19.36■□□□□ 0.69
COL9A3-213ENST00000489045 U3KQV3 271 aa19.36■□□□□ 0.69
COL9A3-213ENST00000489045 TMEM178BH3BS89 294 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 SELEP16581 610 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 SRP9P49458 86 aaKnown RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 SEC61A1P61619 476 aaKnown RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 GK2Q14410 553 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 LNX2Q8N448 690 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 OR51L1Q8NGJ5 315 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 OR10S1Q8NGN2 331 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms