RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 UBTFL6P0CB48 400 aaPredicted RBP1.93□□□□□ -2.1
RFC4-213ENST00000489028 ZNF286BP0CG31 522 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 HOXB8P17481 243 aaPredicted RBP1.93□□□□□ -2.1
RFC4-213ENST00000489028 GGT1P19440 569 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 PMCHP20382 165 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 PTNP21246 168 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 CASQ1P31415 396 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 MAS1LP35410 378 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 CCNG1P51959 295 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 SLC7A9P82251 487 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 HMGCS1Q01581 520 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 RPEL1Q2QD12 228 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 PTPN20Q4JDL3 420 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 TMEM255AQ5JRV8 349 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 MLIPQ5VWP3 458 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 SPECC1LQ69YQ0 1117 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 ADNP2Q6IQ32 1131 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 NPSR1Q6W5P4 371 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 LINC00173Q6ZV60 143 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 MBOAT2Q6ZWT7 520 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 MRPL55Q7Z7F7 128 aaKnown RBP1.93□□□□□ -2.1
RFC4-213ENST00000489028 VKORC1L1Q8N0U8 176 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 PDCL2Q8N4E4 241 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 CBR4Q8N4T8 237 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 OR10J6PQ8NGY7 276 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 ITFG1Q8TB96 612 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 DEDD2Q8WXF8 326 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 RAB1CQ92928 201 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 CREB3L1Q96BA8 519 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 LRRC39Q96DD0 335 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 GPR21Q99679 349 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 SIKE1Q9BRV8 207 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 DEFB129Q9H1M3 183 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 FBXO44Q9H4M3 255 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 HAUS4Q9H6D7 363 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 CD209Q9NNX6 404 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 TMEM9BQ9NQ34 198 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 TRMT112Q9UI30 125 aaKnown RBP1.93□□□□□ -2.1
RFC4-213ENST00000489028 CD84Q9UIB8 345 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 ST3GAL6Q9Y274 331 aa1.93□□□□□ -2.1
RFC4-213ENST00000489028 MRPS18BQ9Y676 258 aaKnown RBP1.93□□□□□ -2.1
RFC4-213ENST00000489028 ADGRA3Q8IWK6 1321 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 PIKFYVEQ9Y2I7 2098 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 A0A1W2PRF3 423 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 A0A1W2PRM7 423 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 ZNF99A8MXY4 864 aaPredicted RBP1.92□□□□□ -2.1
RFC4-213ENST00000489028 ZBTB5O15062 677 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 SUPT3HO75486 399 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 HPRT1P00492 218 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 IGLV2-23P01705 113 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 FABP3P05413 133 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 IVLP07476 585 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 GNAO1P09471 354 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR5H8P0DN80 308 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 GFAPP14136 432 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 RAB4AP20338 218 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OMGP23515 440 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 GABRR2P28476 465 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 CEACAM6P40199 344 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 CXCL5P42830 114 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 NCBP2P52298 156 aaKnown RBP eCLIP1.92□□□□□ -2.1
RFC4-213ENST00000489028 CLDN6P56747 220 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 RPS15AP62244 130 aaKnown RBP1.92□□□□□ -2.1
RFC4-213ENST00000489028 LCN2P80188 198 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 SEMG2Q02383 582 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 ART3Q13508 389 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 TFDP2Q14188 446 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 TMEM183BQ1AE95 376 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 CHRFAM7AQ494W8 412 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 FBXO48Q5FWF7 155 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 TPRG1LQ5T0D9 272 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 RWDD4Q6NW29 188 aaKnown RBP1.92□□□□□ -2.1
RFC4-213ENST00000489028 UNC93AQ86WB7 457 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 HORMAD1Q86X24 394 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 TMEM183AQ8IXX5 376 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 PRSS58Q8IYP2 241 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 LYPD1Q8N2G4 141 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 TRIML2Q8N7C3 387 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 CHST4Q8NCG5 386 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 FBXO36Q8NEA4 188 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR52E2Q8NGJ4 325 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR10G4Q8NGN3 311 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR6Q1Q8NGQ2 317 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR13C9Q8NGT0 318 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR8K3Q8NH51 312 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR51F2Q8NH61 342 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 OR51E1Q8TCB6 317 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 ISOC2Q96AB3 205 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 NTAN1Q96AB6 310 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 EXOSC8Q96B26 276 aaKnown RBP1.92□□□□□ -2.1
RFC4-213ENST00000489028 C19orf60Q96EN9 201 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 GALNT14Q96FL9 552 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 FOXC2Q99958 501 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 GAL3ST2Q9H3Q3 398 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 ACP6Q9NPH0 428 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 ISYNA1Q9NPH2 558 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 UVRAGQ9P2Y5 699 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 FLVCR2Q9UPI3 526 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 STK38LQ9Y2H1 464 aa1.92□□□□□ -2.1
RFC4-213ENST00000489028 F11RQ9Y624 299 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms