RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 C5orf63A6NC05 138 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 A8MXK9 166 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 F5H5K5 113 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 SURF4O15260 269 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 MDKP21741 143 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 RPS27P42677 84 aaKnown RBP13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 GNB2P62879 340 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 FBXW12Q6X9E4 464 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 OR6V1Q8N148 313 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 OR13G1Q8NGZ3 307 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 SLC30A2Q9BRI3 323 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
ERGIC3-217ENST00000488935 IGLV1-36A0A0B4J1U3 117 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 IGHV2-70DA0A0C4DH43 119 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 AHCYL1O43865 530 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 FPR3P25089 353 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 PSME3P61289 254 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 HIST1H3AP68431 136 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 MAB21L1Q13394 359 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 MPPED2Q15777 294 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 HIST2H3PS2Q5TEC6 136 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 GPR139Q6DWJ6 353 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 GLYATQ6IB77 296 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 SHISA2Q6UWI4 295 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 DPY19L2P2Q6ZN68 376 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 HIST2H3AQ71DI3 136 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 ARPINQ7Z6K5 226 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 APOBEC3DQ96AK3 386 aaPredicted RBP13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 C7orf34Q96L11 122 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 WACQ9BTA9 647 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 ZNF446Q9NWS9 450 aa13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 FAM32AQ9Y421 112 aaKnown RBP13.27□□□□□ -0.29
ERGIC3-217ENST00000488935 A0A1W2PRQ8 180 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 HIST1H1CP16403 213 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 SRP9P49458 86 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 FGF12P61328 243 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 POU4F2Q12837 409 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 DGCR6Q14129 220 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 KCNMB1Q16558 191 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 SFRP4Q6FHJ7 346 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 SMARCD3Q6STE5 483 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 LYPD4Q6UWN0 246 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 SPATC1Q76KD6 591 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 MUC20Q8N307 709 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 GJC3Q8NFK1 279 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 OR5L1Q8NGL2 311 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 OR10S1Q8NGN2 331 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 FANK1Q8TC84 345 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 ZNRF4Q8WWF5 429 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 NEIL1Q96FI4 390 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 GPX7Q96SL4 187 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 PITX2Q99697 317 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 COQ7Q99807 217 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 HOPXQ9BPY8 73 aaPredicted RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 NUDT16L1Q9BRJ7 211 aaKnown RBP13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 FUZQ9BT04 418 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 EFCAB1Q9HAE3 211 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 TMEM100Q9NV29 134 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 LRCH1Q9Y2L9 728 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 AP3M1Q9Y2T2 418 aa13.26□□□□□ -0.29
ERGIC3-217ENST00000488935 IQCF6A8MYZ5 107 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 C22orf46C9J442 243 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 FAM20BO75063 409 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 TXNDC12O95881 172 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 HLA-DQA2P01906 255 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 LCATP04180 440 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 ACSM4P0C7M7 580 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 PSKH1P11801 424 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 RHCEP18577 417 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 TUBG1P23258 451 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 PYCR1P32322 319 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 PITPNBP48739 271 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 RGS6P49758 472 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 RPS6KA3P51812 740 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 SPIBQ01892 262 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 GK2Q14410 553 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 ZNF404Q494X3 552 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 PRR31Q5SQ13 230 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 SLC18B1Q6NT16 456 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 BTNL3Q6UXE8 466 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 ADCK1Q86TW2 530 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 SDR9C7Q8NEX9 313 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 SLC26A10Q8NG04 563 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 SLC25A28Q96A46 364 aa13.25□□□□□ -0.29
ERGIC3-217ENST00000488935 DACT3Q96B18 629 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms