RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 AQP12BA6NM10 295 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 PHF1O43189 567 aaPredicted RBP15.03■□□□□ -0
ITGB1-215ENST00000488494 PSKH1P11801 424 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 RAC2P15153 192 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 RPS27P42677 84 aaKnown RBP15.03■□□□□ -0
ITGB1-215ENST00000488494 KRTAP27-1Q3LI81 207 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 FBXW12Q6X9E4 464 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 AQP12AQ8IXF9 295 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 OR5L1Q8NGL2 311 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 ZNRF4Q8WWF5 429 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 RAB1CQ92928 201 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 MAP6Q96JE9 813 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 DDOQ99489 341 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 NIPSNAP1Q9BPW8 284 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 WDR76Q9H967 626 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 HIF1ANQ9NWT6 349 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 DCAF16Q9NXF7 216 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 TMEFF2Q9UIK5 374 aaPredicted RBP15.03■□□□□ -0
ITGB1-215ENST00000488494 BAIAP2Q9UQB8 552 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 COMMD3-BMI1R4GMX3 469 aa15.03■□□□□ -0
ITGB1-215ENST00000488494 RIIAD1A6NNX1 92 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 F5H5K5 113 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 GYPBP06028 91 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 ACSM4P0C7M7 580 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 ZNF823P16415 610 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 PCMT1P22061 227 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 RBMXP38159 391 aaKnown RBP15.02■□□□□ -0
ITGB1-215ENST00000488494 SLC3A1Q07837 685 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 ECH1Q13011 328 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 FLOT2Q14254 428 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 RSPO1Q2MKA7 263 aaPredicted RBP15.02■□□□□ -0
ITGB1-215ENST00000488494 ZNF362Q5T0B9 420 aaPredicted RBP15.02■□□□□ -0
ITGB1-215ENST00000488494 OR2T2Q6IF00 324 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 IQCF1Q8N6M8 205 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 BHLHE23Q8NDY6 225 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 OR10AD1Q8NGE0 317 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 TEX47Q8TBZ9 253 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 GIPC3Q8TF64 312 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 CANT1Q8WVQ1 401 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 ITLN1Q8WWA0 313 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 PTP4A1Q93096 173 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 TMEM186Q96B77 213 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 RAB39BQ96DA2 213 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 FEVQ99581 238 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 GAL3ST1Q99999 423 aa15.02■□□□□ -0
ITGB1-215ENST00000488494 RBM4Q9BWF3 364 aaKnown RBP15.02■□□□□ -0
ITGB1-215ENST00000488494 ARRDC5A6NEK1 342 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 RNF212BA8MTL3 300 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 IFNGP01579 166 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 IGHV2-5P01817 119 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 SPARCP09486 303 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 SPI1P17947 270 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 SRP14P37108 136 aaKnown RBP15.01□□□□□ -0.01
ITGB1-215ENST00000488494 PRSS12P56730 875 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 GK3PQ14409 553 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 COLCA1Q6ZS62 124 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 SPATA24Q86W54 205 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 OR10S1Q8NGN2 331 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 OR6K6Q8NGW6 343 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 SLC7A6OSQ96CW6 309 aaPredicted RBP15.01□□□□□ -0.01
ITGB1-215ENST00000488494 C1QTNF5Q9BXJ0 243 aa15.01□□□□□ -0.01
ITGB1-215ENST00000488494 STAB1Q9NY15 2570 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 H3BN98 237 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 GNGT2O14610 69 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 DEAF1O75398 565 aaPredicted RBP15□□□□□ -0.01
ITGB1-215ENST00000488494 CLUP10909 449 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 ZNF3P17036 446 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 TNFRSF1AP19438 455 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 SLC6A9P48067 706 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 SLC25A1P53007 311 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 CD300LDQ6UXZ3 194 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 TMEM179BQ7Z7N9 219 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 PEG10Q86TG7 708 aaKnown RBP15□□□□□ -0.01
ITGB1-215ENST00000488494 ATG16L2Q8NAA4 619 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 ZNF582Q96NG8 517 aaPredicted RBP15□□□□□ -0.01
ITGB1-215ENST00000488494 OR2V2Q96R30 315 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 NMNAT2Q9BZQ4 307 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 DDX28Q9NUL7 540 aaKnown RBP15□□□□□ -0.01
ITGB1-215ENST00000488494 TMEM106BQ9NUM4 274 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 UBAP1Q9NZ09 502 aa15□□□□□ -0.01
ITGB1-215ENST00000488494 PDP1Q9P0J1 537 aaPredicted RBP15□□□□□ -0.01
ITGB1-215ENST00000488494 IQCF6A8MYZ5 107 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 M0R135 149 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 SURF4O15260 269 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 E2F6O75461 281 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 DNAJC8O75937 253 aaPredicted RBP14.99□□□□□ -0.01
ITGB1-215ENST00000488494 LCATP04180 440 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 GRK5P34947 590 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 ENTPD1P49961 510 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 TPTEP56180 551 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 ACSM5Q6NUN0 579 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 DCXRQ7Z4W1 244 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 ZNF511Q8NB15 262 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 OR8G5Q8NG78 346 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 SPTSSAQ969W0 71 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 ZNF799Q96GE5 643 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 COPS4Q9BT78 406 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 HCAR1Q9BXC0 346 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 MED20Q9H944 212 aa14.99□□□□□ -0.01
ITGB1-215ENST00000488494 CMC2Q9NRP2 79 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms