RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 K7EMT4 169 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 DNASE2O00115 360 aaPredicted RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 UBXN8O00124 270 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 SIRPB1O00241 398 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 EIF4E2O60573 245 aaKnown RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 FLOT1O75955 427 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 HLA-DQB1P01920 261 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 FTH1P02794 183 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 ARG1P05089 322 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 SERPINE2P07093 398 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 CTSLP07711 333 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 P0C880 135 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 ERGP11308 486 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 ATF6P18850 670 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 U2AF2P26368 475 aaKnown RBP eCLIP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 LOXP28300 417 aaPredicted RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 RRM2P31350 389 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 TNNT2P45379 298 aaPredicted RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 TAS2R31P59538 309 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 RPS23P62266 143 aaKnown RBP1.49□□□□□ -2.17
CCDC66-221ENST00000487739 CDK5Q00535 292 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 DGCR6Q14129 220 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 HSP90AB3PQ58FF7 597 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 AVPI1Q5T686 147 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 C22orf42Q6IC83 251 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 CMC1Q7Z7K0 106 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 NKAIN4Q8IVV8 208 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 TMEM256Q8N2U0 113 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 C11orf72Q8NBR9 251 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 CHST4Q8NCG5 386 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 OR52E2Q8NGJ4 325 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 PANX1Q96RD7 426 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF391Q9UJN7 358 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 SIGLEC9Q9Y336 463 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 HYOU1Q9Y4L1 999 aa1.49□□□□□ -2.17
CCDC66-221ENST00000487739 PALLDQ8WX93 1383 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 BRCA1P38398 1863 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 SMIM26A0A096LP01 95 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 TRAV19A0A0A6YYK7 116 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 TRBV11-1A0A0K0K1C0 115 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 GABRR3A8MPY1 467 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 LGALS9O00182 355 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 CHST1O43916 411 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 IGLV3-25P01717 112 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 CD37P11049 281 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 OR1E1P30953 314 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 RAB10P61026 200 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 CRADDP78560 199 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 PRR3P79522 188 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 SEMG2Q02383 582 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF616Q08AN1 781 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 TRAM2Q15035 370 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 QPRTQ15274 297 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 RBMY1FQ15415 496 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 RNASE13Q5GAN3 156 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 TCEAL5Q5H9L2 206 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 CCDC183Q5T5S1 534 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 ARMC12Q5T9G4 340 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 UBE2UQ5VVX9 321 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 LRRC66Q68CR7 880 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 NPSR1Q6W5P4 371 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 MRPL55Q7Z7F7 128 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 GPR26Q8NDV2 337 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 OR11H7Q8NGC8 314 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 LYPD6BQ8NI32 183 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 APH1BQ8WW43 257 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 TCEAL3Q969E4 200 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 SLC25A46Q96AG3 418 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 RBBP8Q99708 897 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 C20orf24Q9BUV8 137 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 GGTLC1Q9BX51 225 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 AGPAT4Q9NRZ5 378 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 CCDC59Q9P031 241 aaKnown RBP1.48□□□□□ -2.17
CCDC66-221ENST00000487739 SLC17A4Q9Y2C5 497 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 ADGRL1O94910 1474 aa1.48□□□□□ -2.17
CCDC66-221ENST00000487739 A0A0J9YXV3 536 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 VGLL3A8MV65 326 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 C9JVG2 144 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 NDUFC2-KCTD14E9PQ53 114 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 PLPP1O14494 284 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 SCAMP2O15127 329 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 RAD51CO43502 376 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 ERLIN1O75477 346 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 WBP4O75554 376 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CD74P04233 296 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 ZNF688P0C7X2 276 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CT45A6P0DMU7 189 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CT45A5P0DMU8 189 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CT45A7P0DMV0 189 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CSNK2A2P19784 350 aaPredicted RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 BCKDHBP21953 392 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CALRP27797 417 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 GTF2E2P29084 291 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 RBM34P42696 430 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 PRRX1P54821 245 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 RPL23P62829 140 aaKnown RBP1.47□□□□□ -2.17
CCDC66-221ENST00000487739 LIPEQ05469 1076 aa1.47□□□□□ -2.17
CCDC66-221ENST00000487739 CYP24A1Q07973 514 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms