RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 ROBO1Q9Y6N7 1651 aa2.3□□□□□ -2.04
TTC3-220ENST00000487711 COL5A3P25940 1745 aaPredicted RBP2.3□□□□□ -2.04
TTC3-220ENST00000487711 COL24A1Q17RW2 1714 aa2.3□□□□□ -2.04
TTC3-220ENST00000487711 NRAPQ86VF7 1730 aa2.3□□□□□ -2.04
TTC3-220ENST00000487711 NUP98P52948 1817 aa2.3□□□□□ -2.04
TTC3-220ENST00000487711 KIF26AQ9ULI4 1882 aaPredicted RBP2.3□□□□□ -2.04
TTC3-220ENST00000487711 ECM29Q5VYK3 1845 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 LAMB1P07942 1786 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 STRCQ7RTU9 1775 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 BCL9O00512 1426 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 GAKO14976 1311 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 NFASCO94856 1347 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 A0A0D9SFI3 127 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 LINC00854A0A1B0GVQ3 168 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SERPINE3A8MV23 424 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SUPT3HB4E1H0 165 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 GOLGA8SH3BPF8 625 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 GOLGA8TH3BQL2 631 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 TRDMT1O14717 391 aaKnown RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 CTDNEP1O95476 244 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 TPM1P09493 284 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 CT62P0C5K7 136 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 ZDHHC11BP0C7U3 371 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 ZNF30P17039 623 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 PRKACAP17612 351 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SRMP19623 302 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 EIF2S2P20042 333 aaKnown RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 KITLGP21583 273 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 OPRD1P41143 372 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 FGF8P55075 233 aaPredicted RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 IRX3P78415 501 aaPredicted RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 LIPEQ05469 1076 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 GNMTQ14749 295 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 ALX1Q15699 326 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 UBE2SQ16763 222 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 TMEM53Q6P2H8 277 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 LYPD2Q6UXB3 125 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 H2AFVQ71UI9 128 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 UTS2BQ765I0 119 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SSX9Q7RTT3 188 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 NUDCD3Q8IVD9 361 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SDR9C7Q8NEX9 313 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 OR1L6Q8NGR2 347 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 UBALD1Q8TB05 177 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 FAM110BQ8TC76 370 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 ACMSDQ8TDX5 336 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 NRGNQ92686 78 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 SMARCD2Q92925 531 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 AURKBQ96GD4 344 aaPredicted RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 MRPL37Q9BZE1 423 aaKnown RBP2.29□□□□□ -2.04
TTC3-220ENST00000487711 LY9Q9HBG7 655 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 INPP5EQ9NRR6 644 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 STARD10Q9Y365 291 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 MYH13Q9UKX3 1938 aa2.29□□□□□ -2.04
TTC3-220ENST00000487711 DOT1LQ8TEK3 1739 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 BCL9LQ86UU0 1499 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 UQCRHLA0A096LP55 91 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 A0A0J9YYE9 177 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 PLAC8L1A1L4L8 177 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 VPS37CA5D8V6 355 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 GOLGA6L19H0YKK7 550 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 H3BQV1 296 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 ATP8B1O43520 1251 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 ENTPD5O75356 428 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 H6PDO95479 791 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TMEM50AO95807 157 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 SNAI1O95863 264 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 TRBC1P01850 177 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 BGLAPP02818 100 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 UQCRHP07919 91 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 HSPD1P10809 573 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 ZNF43P17038 809 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TCN1P20061 433 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 MSR1P21757 451 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TUBG1P23258 451 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 CD1CP29017 333 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 HNRNPH3P31942 346 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 RORAP35398 523 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 DAOAP59103 153 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 CDK16Q00536 496 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TRDNQ13061 729 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 DNAJC3Q13217 504 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 PPIL2Q13356 520 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 MOBPQ13875 183 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 LY6EQ16553 131 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 HIKESHIQ53FT3 197 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 C5orf47Q569G3 176 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 HSP90B2PQ58FF3 399 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 LY6G6FQ5SQ64 297 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TTC19Q6DKK2 380 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 NANOGP8Q6NSW7 305 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 ENPP6Q6UWR7 440 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 COPS6Q7L5N1 327 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 IQCF2Q8IXL9 164 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms