RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SLC38A5Q8WUX1 472 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 PTP4A1Q93096 173 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 CCDC115Q96NT0 180 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 ASIC5Q9NY37 505 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 RPS6KB2Q9UBS0 482 aa6.63□□□□□ -1.35
XRN1-212ENST00000486211 UTP11Q9Y3A2 253 aaKnown RBP6.63□□□□□ -1.35
XRN1-212ENST00000486211 TSSC4Q9Y5U2 329 aaPredicted RBP6.63□□□□□ -1.35
XRN1-212ENST00000486211 A0A0B4J2E0 115 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 A0A1B0GW55 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 A0A1B0GX12 115 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 TCRBV4S1A1TA0A5B7 111 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 NKX6-3A6NJ46 265 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 GOLGA6L6A8MZA4 724 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 CENPBD1B2RD01 187 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 NDUFA2O43678 99 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 PLIN3O60664 434 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 TRMUO75648 421 aaKnown RBP6.62□□□□□ -1.35
XRN1-212ENST00000486211 CLIC3O95833 236 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 IGF2P01344 180 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 GYPAP02724 150 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 THY1P04216 161 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 HLA-DPB1P04440 258 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 BCHEP06276 602 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L2P0CJ85 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L3P0CJ86 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L4P0CJ87 422 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L5P0CJ88 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L6P0CJ89 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L7P0CJ90 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 LAP3P28838 519 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 CDKN2CP42773 168 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 PAFAH1B1P43034 410 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 HTR5AP47898 357 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 CRISP3P54108 245 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 FMODQ06828 376 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 SGCAQ16586 387 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ANXA8L1Q5VT79 327 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 PRAMEF6Q5VXH4 476 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4L9Q6RFH8 374 aaPredicted RBP6.62□□□□□ -1.35
XRN1-212ENST00000486211 UNQ9370/PRO34162Q6UXP9 181 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 FBXW12Q6X9E4 464 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 FAM90A1Q86YD7 464 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 C10orf53Q8N6V4 93 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 SPATA4Q8NEY3 305 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 OR11L1Q8NGX0 322 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ACMSDQ8TDX5 336 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 MZB1Q8WU39 189 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ST8SIA4Q92187 359 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 MYDGFQ969H8 173 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ERGIC1Q969X5 290 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ECSITQ9BQ95 431 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 TMEM43Q9BTV4 400 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
XRN1-212ENST00000486211 ARMC7Q9H6L4 198 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 MEAF6Q9HAF1 191 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 P2RX2Q9UBL9 471 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 KAAG1Q9UBP8 84 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 DUX4Q9UBX2 424 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 ZMAT5Q9UDW3 170 aaKnown RBP6.62□□□□□ -1.35
XRN1-212ENST00000486211 NDRG4Q9ULP0 352 aaKnown RBP6.62□□□□□ -1.35
XRN1-212ENST00000486211 TIMM10BQ9Y5J6 103 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 SAR1BQ9Y6B6 198 aa6.62□□□□□ -1.35
XRN1-212ENST00000486211 OOEPA6NGQ2 149 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CCDC154A6NI56 674 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 IQCF6A8MYZ5 107 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 RNF13O43567 381 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 PEX14O75381 377 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 SLC22A3O75751 556 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 OR6A2O95222 327 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CST2P09228 141 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 COX5BP10606 129 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CD200P41217 278 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 BLCAPP62952 87 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 ELF3P78545 371 aaPredicted RBP6.61□□□□□ -1.35
XRN1-212ENST00000486211 EMX2Q04743 252 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 ENDOGQ14249 297 aaKnown RBP6.61□□□□□ -1.35
XRN1-212ENST00000486211 CNN3Q15417 329 aaKnown RBP6.61□□□□□ -1.35
XRN1-212ENST00000486211 ZNF74Q16587 644 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 SPANXN4Q5MJ08 99 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CEP85LQ5SZL2 805 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 SLC25A47Q6Q0C1 308 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CMTM4Q8IZR5 234 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CLDN22Q8N7P3 220 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 ASB10Q8WXI3 467 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 TESCQ96BS2 214 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 TMEM19Q96HH6 336 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 KIRREL1Q96J84 757 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 ZNF582Q96NG8 517 aaPredicted RBP6.61□□□□□ -1.35
XRN1-212ENST00000486211 PRSS22Q9GZN4 317 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 MYLK2Q9H1R3 596 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 SMURF2Q9HAU4 748 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 UFSP2Q9NUQ7 469 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 CALML5Q9NZT1 146 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 RNF7Q9UBF6 113 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 DCDC2Q9UHG0 476 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 BTNL2Q9UIR0 455 aa6.61□□□□□ -1.35
XRN1-212ENST00000486211 IFT52Q9Y366 437 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms