RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 IQCMA0A1B0GVH7 501 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 A0A1W2PQL4 384 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZC3H12DA2A288 527 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF716A6NP11 495 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 E7EQL1 145 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ABCD4O14678 606 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 OGG1O15527 345 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 WIPF1O43516 503 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 RNF13O43567 381 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CRLF1O75462 422 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 RAD51DO75771 328 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 APOL3O95236 402 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF12P17014 697 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CELP19835 753 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CRABP1P29762 137 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ETV6P41212 452 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CDKN2AP42771 156 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 TGM4P49221 684 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF85Q03923 595 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 PUDPQ08623 228 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 PPA1Q15181 289 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 LINC01590Q5TEZ4 76 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 C9orf135Q5VTT2 229 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 RPL22L1Q6P5R6 122 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 DNM1P34Q6PK57 102 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 DNM1P46Q6ZS02 220 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 TMPPEQ6ZT21 453 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 Q6ZT83 130 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 PXKQ7Z7A4 578 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 KLBQ86Z14 1044 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF433Q8N7K0 673 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF519Q8TB69 540 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 FNDC8Q8TC99 324 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 HSD17B8Q92506 261 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC25A36Q96CQ1 311 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 RASD2Q96D21 266 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 TSPAN32Q96QS1 320 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 TRAF4Q9BUZ4 470 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CDADC1Q9BWV3 514 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 NUAK2Q9H093 628 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CISD1Q9NZ45 108 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 VSX1Q9NZR4 365 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF346Q9UL40 294 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 PMF1-BGLAPU3KQ54 211 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 ALPK2Q86TB3 2170 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 CADP27708 2225 aa8.19□□□□□ -1.1
TMEM39A-208ENST00000486159 IGHV4-30-2A0A087WSY4 118 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 PRSS37A4D1T9 235 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 LIPT2A6NK58 231 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 GJE1A6NN92 205 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 SULT2B1O00204 365 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 DNPH1O43598 174 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 SSX4O60224 188 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 TMEM127O75204 238 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 SULT1C4O75897 302 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 LY6HO94772 140 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 F13BP05160 661 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 TFPIP10646 304 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 CLUP10909 449 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 IMPDH2P12268 514 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 COX5AP20674 150 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 OPRL1P41146 370 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF83P51522 516 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 RPS25P62851 125 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 EGR3Q06889 387 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 MESTQ5EB52 335 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 C16orf87Q6PH81 154 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 TPRA1Q86W33 373 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF100Q8IYN0 542 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 UBE2J2Q8N2K1 259 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 WDR31Q8NA23 367 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 SNX33Q8WV41 574 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ASB17Q8WXJ9 295 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 THRSPQ92748 146 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 SLC25A46Q96AG3 418 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ZMYND19Q96E35 227 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 C4orf36Q96KX1 117 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF587Q96SQ5 575 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 ESRP2Q9H6T0 727 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 RPRD1BQ9NQG5 326 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 KLHL9Q9P2J3 617 aa8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 YLPM1P49750 1951 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-208ENST00000486159 A0A096LNT2 108 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF724A8MTY0 619 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 LOC110117498-PIK3R3F6TDL0 507 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 J3QLW9 94 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 GATBO75879 557 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 PMS2P2O95744 297 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 GYPBP06028 91 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ITGA5P08648 1049 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 NR2C1P13056 603 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 ZNF19P17023 458 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 AHCYP23526 432 aa8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 CALRP27797 417 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-208ENST00000486159 RPS19P39019 145 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms