RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 OR6C74A6NCV1 312 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 INSP01308 110 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 EIF4EP06730 217 aaKnown RBP3.16□□□□□ -1.9
VPS13A-211ENST00000484581 PGA5P0DJD9 388 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 FUT3P21217 361 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 ZBTB25P24278 435 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 CEACAM3P40198 252 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 CTRLP40313 264 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 CSNK1A1P48729 337 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 PPP1CBP62140 327 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 SLC35B1P78383 322 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 DAZ2Q13117 558 aaKnown RBP3.16□□□□□ -1.9
VPS13A-211ENST00000484581 IL17AQ16552 155 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF630Q2M218 657 aaPredicted RBP3.16□□□□□ -1.9
VPS13A-211ENST00000484581 LYPD2Q6UXB3 125 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 P2RY8Q86VZ1 359 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 SNX31Q8N9S9 440 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 OR10W1Q8NGF6 305 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 LINC01006Q8NI28 216 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 RCN3Q96D15 328 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 DYNLL2Q96FJ2 89 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 OR52A5Q9H2C5 316 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 LINC00597Q9H2U6 94 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 VCX3AQ9NNX9 186 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 DAZ3Q9NR90 486 aaKnown RBP3.16□□□□□ -1.9
VPS13A-211ENST00000484581 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 CAMTA1Q9Y6Y1 1673 aa3.16□□□□□ -1.9
VPS13A-211ENST00000484581 JCADQ9P266 1359 aa3.15□□□□□ -1.9
VPS13A-211ENST00000484581 WDR62O43379 1518 aa3.15□□□□□ -1.9
VPS13A-211ENST00000484581 ERICH2A1L162 156 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 FAM166BA8MTA8 275 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 H7C1H1 209 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 CETN3O15182 167 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 RDH16O75452 317 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 GCGP01275 180 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 FABP3P05413 133 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 PGA4P0DJD7 388 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 PGA3P0DJD8 388 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 ERGP11308 486 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 CD1EP15812 388 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 GABRG2P18507 467 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 IL32P24001 234 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 PPICP45877 212 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 VSX2P58304 361 aaPredicted RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 DSCR10P59022 87 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 PSG5Q15238 335 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 GCSAMLQ5JQS6 135 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 TMEM255AQ5JRV8 349 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 CD300LGQ6UXG3 332 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 NDUFAF7Q7L592 441 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 COMTD1Q86VU5 262 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 FAM71E2Q8N5Q1 922 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 C11orf42Q8N5U0 333 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 WDR31Q8NA23 367 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 MDS2Q8NDY4 140 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 OR10AD1Q8NGE0 317 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 OR6N2Q8NGY6 317 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 LGALS14Q8TCE9 139 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 SGTBQ96EQ0 304 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 CENPNQ96H22 339 aaPredicted RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 BTN2A3PQ96KV6 586 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 IMMP1LQ96LU5 166 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 ZNF681Q96N22 645 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 WFIKKN1Q96NZ8 548 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 ZNF317Q96PQ6 595 aaPredicted RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 NAPGQ99747 312 aaPredicted RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 UQCC2Q9BRT2 126 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 YTHDF1Q9BYJ9 559 aaKnown RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 SYT4Q9H2B2 425 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 SPACA1Q9HBV2 294 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 UVRAGQ9P2Y5 699 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 GGA2Q9UJY4 613 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 ARHGAP23Q9P227 1491 aa3.15□□□□□ -1.91
VPS13A-211ENST00000484581 ZNFX1Q9P2E3 1918 aaKnown RBP3.15□□□□□ -1.91
VPS13A-211ENST00000484581 GOLGA8QA0A0J9YX86 632 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 ANKRD63C9JTQ0 380 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 H7C417 338 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 TRAF3IP2O43734 574 aaPredicted RBP3.14□□□□□ -1.91
VPS13A-211ENST00000484581 SLC16A7O60669 478 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 ALOX12BO75342 701 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 SUPT3HO75486 399 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 SMC2O95347 1197 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 IGLV2-23P01705 113 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 GLAP06280 429 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 RHOCP08134 193 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 PNMA6AP0CW24 399 aaPredicted RBP3.14□□□□□ -1.91
VPS13A-211ENST00000484581 CD37P11049 281 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 OMGP23515 440 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 AP1S2P56377 157 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 TAS2R60P59551 318 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 PAFAH1B2P68402 229 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 HMGCS1Q01581 520 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 POU2AF1Q16633 256 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 NDUFAF6Q330K2 333 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 CPTPQ5TA50 214 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 PDPK2PQ6A1A2 396 aa3.14□□□□□ -1.91
VPS13A-211ENST00000484581 ERICH5Q6P6B1 374 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms